-
Rational design of a covalent ACE2 decoy receptor that broadly neutralizes SARS-CoV-2 variants.
Nobumasa Hino, Risa Takada, Kyosuke Suzuki, Nagisa Tokunoh, Tatsuya Karaki, Kazumasa Ohtake, Haruna Ogami, Takafumi Nishiura, Kenji Ishimoto, Tomohito Tsukamoto, Yukio Ago, Yoshiaki Okada, Toru Okamoto, Chikako Ono, Yoshiharu Matsuura, Satoshi Obika, Kensaku Sakamoto, Yasuo Yoshioka, Shinsaku Nakagawa
Protein science : a publication of the Protein Society Vol. 34 No. 10 2025/10 Research paper (scientific journal)
-
ATP binding controls the molecular function of bacterial MutS2 by mediating closure of the dimeric clamp structure.
Kenji Fukui, Takeshi Murakawa, Nobumasa Hino, Naoyuki Kondo, Takato Yano
Structure (London, England : 1993) 2025/03/20 Research paper (scientific journal)
-
Endothelial ROBO4 suppresses PTGS2/COX-2 expression and inflammatory diseases.
Masato Tanaka, Keisuke Shirakura, Yui Takayama, Miki Μatsui, Yukio Watanabe, Takuya Yamamoto, Junya Takahashi, Shota Tanaka, Nobumasa Hino, Takefumi Doi, Masanori Obana, Yasushi Fujio, Kazuo Takayama, Yoshiaki Okada
Communications biology Vol. 7 No. 1 p. 599-599 2024/05/18 Research paper (scientific journal)
-
Suppressive effect of black tea polyphenol theaflavins in a mouse model of ovalbumin-induced food allergy.
Kenji Ishimoto, Yuma Konishi, Shuichi Otani, Soya Maeda, Yukio Ago, Nobumasa Hino, Masayuki Suzuki, Shinsaku Nakagawa
Journal of natural medicines Vol. 77 No. 3 p. 604-609 2023/03/01 Research paper (scientific journal)
-
Upregulation of Robo4 expression by SMAD signaling suppresses vascular permeability and mortality in endotoxemia and COVID-19 models.
Maaya Morita, Aki Yoneda, Nagisa Tokunoh, Tatsumi Masaki, Keisuke Shirakura, Mayumi Kinoshita, Rina Hashimoto, Naoya Shigesada, Junya Takahashi, Masashi Tachibana, Shota Tanaka, Masanori Obana, Nobumasa Hino, Masahito Ikawa, Kazutake Tsujikawa, Chikako Ono, Yoshiharu Matsuura, Hiroyasu Kidoya, Nobuyuki Takakura, Yoshiaki Kubota, Takefumi Doi, Kazuo Takayama, Yasuo Yoshioka, Yasushi Fujio, Yoshiaki Okada
Proceedings of the National Academy of Sciences of the United States of America Vol. 120 No. 3 2023/01/17 Research paper (scientific journal)
-
Physicochemical and Biochemical Evaluation of Amorphous Solid Dispersion of Naringenin Prepared Using Hot-Melt Extrusion
Kenji Ishimoto, Yukiko Shimada, Akane Ohno, Shuichi Otani, Yukio Ago, Soya Maeda, Bangzhong Lin, Kazuto Nunomura, Nobumasa Hino, Masayuki Suzuki, Shinsaku Nakagawa
Frontiers in Nutrition Vol. 9 p. 850103-850103 2022/04/27 Research paper (scientific journal)
Publisher: Frontiers Media SA
-
HDAC inhibitor, MS-275, increases vascular permeability by suppressing Robo4 expression in endothelial cells.
Taito Kashio, Keisuke Shirakura, Mayumi Kinoshita, Maaya Morita, Ryosuke Ishiba, Kosuke Muraoka, Tomoaki Kanbara, Masato Tanaka, Risa Funatsu, Nobumasa Hino, Shohei Koyama, Ryo Suzuki, Yasuo Yoshioka, Taiki Aoshi, Takefumi Doi, Yoshiaki Okada
Tissue barriers Vol. 9 No. 3 p. 1911195-1911195 2021/05/06 Research paper (scientific journal)
-
Generation of KS-133 as a Novel Bicyclic Peptide with a Potent and Selective VIPR2 Antagonist Activity that Counteracts Cognitive Decline in a Mouse Model of Psychiatric Disorders.
Kotaro Sakamoto, Lu Chen, Tatsunori Miyaoka, Mei Yamada, Teruaki Masutani, Kenji Ishimoto, Nobumasa Hino, Shinsaku Nakagawa, Satoshi Asano, Yukio Ago
Frontiers in pharmacology Vol. 12 p. 751587-751587 2021 Research paper (scientific journal)
-
PRC2 Components Maintain DNA Hypermethylation of the Upstream Promoter and Regulate Robo4 Expression in Endothelial Cells.
Kohei Izawa, Keisuke Shirakura, Koji Kakiuchi, Nobuaki Funahashi, Naoki Maekawa, Nobumasa Hino, Toru Tanaka, Takefumi Doi, Yoshiaki Okada
Biological & pharmaceutical bulletin Vol. 43 No. 4 p. 742-746 2020 Research paper (scientific journal)
-
Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase.
Yanagisawa T, Kuratani M, Seki E, Hino N, Sakamoto K, Yokoyama S
Cell chemical biology Vol. 26 No. 7 p. 936-949 2019/04 Research paper (scientific journal)
-
Cell-autonomous and redundant roles of Hey1 and HeyL in muscle stem cells: HeyL requires Hes1 to bind diverse DNA sites.
Yu-Taro Noguchi, Miki Nakamura, Nobumasa Hino, Jumpei Nogami, Sayaka Tsuji, Takahiko Sato, Lidan Zhang, Kazutake Tsujikawa, Toru Tanaka, Kohei Izawa, Yoshiaki Okada, Takefumi Doi, Hiroki Kokubo, Akihito Harada, Akiyoshi Uezumi, Manfred Gessler, Yasuyuki Ohkawa, So-Ichiro Fukada
Development (Cambridge, England) Vol. 146 No. 4 2019/02/20 Research paper (scientific journal)
-
Lipin-1 is a novel substrate of protein phosphatase PGAM5.
Okuno H, Okuzono H, Hayase A, Kumagai F, Tanii S, Hino N, Okada Y, Tachibana K, Doi T, Ishimoto K
Biochemical and biophysical research communications Vol. 509 No. 4 p. 886-891 2019/01 Research paper (scientific journal)
-
The Robo4-TRAF7 complex suppresses endothelial hyperpermeability in inflammation.
Shirakura K, Ishiba R, Kashio T, Funatsu R, Tanaka T, Fukada SI, Ishimoto K, Hino N, Kondoh M, Ago Y, Fujio Y, Yano K, Doi T, Aird WC, Okada Y
Journal of cell science Vol. 132 No. 1 2019/01 Research paper (scientific journal)
-
ETV2-TET1/TET2 Complexes Induce Endothelial Cell-Specific Robo4 Expression via Promoter Demethylation.
Toru Tanaka, Kohei Izawa, Yusuke Maniwa, Maki Okamura, Atsumasa Okada, Tomoko Yamaguchi, Keisuke Shirakura, Naoki Maekawa, Hayato Matsui, Kenji Ishimoto, Nobumasa Hino, Osamu Nakagawa, William C Aird, Hiroyuki Mizuguchi, Kenji Kawabata, Takefumi Doi, Yoshiaki Okada
Scientific reports Vol. 8 No. 1 p. 5653-5653 2018/04/04 Research paper (scientific journal)
-
Endothelial Robo4 regulates IL-6 production by endothelial cells and monocytes via a crosstalk mechanism in inflammation
Keisuke Shirakura, Ryosuke Ishiba, Taito Kashio, Miki Sakai, Yu Fukushima, Nana Yamamoto, Shiori Manabe, Naoya Shigesada, Toru Tanaka, Nobumasa Hino, William C. Aird, Takefumi Doi, Yoshiaki Okada
Biochemical and Biophysical Research Communications Vol. 495 No. 1 p. 801-806 2018/01/01 Research paper (scientific journal)
Publisher: Elsevier B.V.
-
Covalently capturing protein interactions in living cells by site-specific incorporation of photo-cross-linkable amino acids
Nobumasa Hino, Kensaku Sakamoto
Photoaffinity Labeling for Structural Probing Within Protein p. 159-181 2017/09/25 Part of collection (book)
Publisher: Springer Japan
-
Degradation of human Lipin-1 by BTRC E3 ubiquitin ligase
Kenji Ishimoto, Ayaka Hayase, Fumiko Kumagai, Megumi Kawai, Hiroko Okuno, Nobumasa Hino, Yoshiaki Okada, Takeshi Kawamura, Toshiya Tanaka, Takao Hamakubo, Juro Sakai, Tatsuhiko Kodama, Keisuke Tachibana, Takefumi Doi
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS Vol. 488 No. 1 p. 159-164 2017/06 Research paper (scientific journal)
-
Tumor Necrosis Factor alpha Induces the Expression of the Endothelial Cell-Specific Receptor Roundabout4 through the Nuclear Factor-kappa B Pathway
Toru Tanaka, Naoki Maekawa, Taito Kashio, Kohei Izawa, Ryosuke Ishiba, Keisuke Shirakura, Kenji Ishimoto, Nobumasa Hino, William C. Aird, Takefumi Doi, Yoshiaki Okada
BIOLOGICAL & PHARMACEUTICAL BULLETIN Vol. 40 No. 4 p. 504-509 2017/04 Research paper (scientific journal)
-
Adenovirus vector-based incorporation of a photo-cross-linkable amino acid into proteins in human primary cells and cancerous cell lines
Ayami Kita, Nobumasa Hino, Sakiko Higashi, Kohji Hirota, Ryohei Narumi, Jun Adachi, Kazuaki Takafuji, Kenji Ishimoto, Yoshiaki Okada, Kensaku Sakamoto, Takeshi Tomonaga, Seiji Takashima, Hiroyuki Mizuguchi, Takefumi Doi
SCIENTIFIC REPORTS Vol. 6 p. 36946-36946 2016/11 Research paper (scientific journal)
-
Ubiquitination of Lysine 867 of the Human SETDB1 Protein Upregulates Its Histone H3 Lysine 9 (H3K9) Methyltransferase Activity
Kenji Ishimoto, Natsuko Kawamata, Yoshie Uchihara, Moeka Okubo, Reiko Fujimoto, Eiko Gotoh, Keisuke Kakinouchi, Eiichi Mizohata, Nobumasa Hino, Yoshiaki Okada, Yasuhiro Mochizuki, Toshiya Tanaka, Takao Hamakubo, Juro Sakai, Tatsuhiko Kodama, Tsuyoshi Inoue, Keisuke Tachibana, Takefumi Doi
PLOS ONE Vol. 11 No. 10 2016/10 Research paper (scientific journal)
-
A Method for Protein Photo-cross-linking in Living Cells Facilitating Analysis of Physiological Interactions of Proteins
Hino Nobumasa
YAKUGAKU ZASSHI Vol. 135 No. 12 p. 1357-1363 2015/12 Research paper (scientific journal)
Publisher: The Pharmaceutical Society of Japan
-
Expression of the Robo4 receptor in endothelial cells is regulated by two AP-1 protein complexes
Yoshiaki Okada, Hiroki Naruse, Toru Tanaka, Nobuaki Funahashi, Erzsebet Ravasz Regan, Kazuma Yamakawa, Nobumasa Hino, Kenji Ishimoto, Takefumi Doi, William C. Aird
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS Vol. 467 No. 4 p. 987-991 2015/11 Research paper (scientific journal)
-
Endothelial Cell-Specific Expression of Roundabout 4 Is Regulated by Differential DNA Methylation of the Proximal Promoter
Yoshiaki Okada, Nobuaki Funahashi, Toru Tanaka, Yuji Nishiyama, Lei Yuan, Keisuke Shirakura, Alexis S. Turjman, Yoshihiro Kano, Hiroki Naruse, Ayano Suzuki, Miki Sakai, Jiang Zhixia, Kenji Kitajima, Kenji Ishimoto, Nobumasa Hino, Masuo Kondoh, Yohei Mukai, Shinsaku Nakagawa, Guillermo Garcia-Cardena, William C. Aird, Takefumi Doi
ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY Vol. 34 No. 7 p. 1531-+ 2014/07 Research paper (scientific journal)
-
Tetrameric interaction of the ectoenzyme CD38 on the cell surface enables its catalytic and raft-association activities
Miki Hara-Yokoyama, Mutsuko Kukimoto-Niino, Kazue Terasawa, Satoru Harumiya, Katarzyna A. Podyma-Inoue, Nobumasa Hino, Kensaku Sakamoto, Satsuki Itoh, Noritaka Hashii, Yoko Hiruta, Nana Kawasaki, Chiemi Mishima-Tsumagari, Yoko Kaitsu, Tomoko Matsumoto, Motoaki Wakiyama, Mikako Shirouzu, Takeshi Kasama, Hiroshi Takayanagi, Naoko Utsunomiya-Tate, Kiyoshi Takatsu, Toshiaki Katada, Yoshio Hirabayashi, Shigeyuki Yokoyama, Masaki Yanagishita
Structure Vol. 20 No. 9 p. 1585-1595 2012/09/05 Research paper (scientific journal)
-
Tetrameric Interaction of the Ectoenzyme CD38 on the Cell Surface Enables Its Catalytic and Raft-Association Activities
Miki Hara-Yokoyama, Mutsuko Kukimoto-Niino, Kazue Terasawa, Satoru Harumiya, Katarzyna A. Podyma-Inoue, Nobumasa Hino, Kensaku Sakamoto, Satsuki Itoh, Noritaka Hashii, Yoko Hiruta, Nana Kawasaki, Chiemi Mishima-Tsumagari, Yoko Kaitsu, Tomoko Matsumoto, Motoaki Wakiyama, Mikako Shirouzu, Takeshi Kasama, Hiroshi Takayanagi, Naoko Utsunomiya-Tate, Kiyoshi Takatsu, Toshiaki Katada, Yoshio Hirabayashi, Shigeyuki Yokoyama, Masaki Yanagishita
STRUCTURE Vol. 20 No. 9 p. 1585-1595 2012/09 Research paper (scientific journal)
-
Structural basis of interleukin-5 dimer recognition by its a receptor
Seisuke Kusano, Mutsuko Kukimoto-Niino, Nobumasa Hino, Noboru Ohsawa, Masashi Ikutani, Satoshi Takaki, Kensaku Sakamoto, Miki Hara-Yokoyama, Mikako Shirouzu, Kiyoshi Takatsu, Shigeyuki Yokoyama
PROTEIN SCIENCE Vol. 21 No. 6 p. 850-864 2012/06 Research paper (scientific journal)
-
Efficient Decoding of the UAG Triplet as a Full-Fledged Sense Codon Enhances the Growth of a prfA-Deficient Strain of Escherichia coli
Kazumasa Ohtake, Aya Sato, Takahito Mukai, Nobumasa Hino, Shigeyuki Yokoyama, Kensaku Sakamoto
JOURNAL OF BACTERIOLOGY Vol. 194 No. 10 p. 2606-2613 2012/05 Research paper (scientific journal)
-
Structural basis for extracellular interactions between calcitonin receptor-like receptor and receptor activity-modifying protein 2 for adrenomedullin-specific binding
Seisuke Kusano, Mutsuko Kukimoto-Niino, Nobumasa Hino, Noboru Ohsawa, Ken-ichi Okuda, Kensaku Sakamoto, Mikako Shirouzu, Takayuki Shindo, Shigeyuki Yokoyama
PROTEIN SCIENCE Vol. 21 No. 2 p. 199-210 2012/02 Research paper (scientific journal)
-
Site-specific incorporation of unnatural amino acids into proteins in mammalian cells.
Hino N, Sakamoto K, Yokoyama S
Methods in molecular biology (Clifton, N.J.) Vol. 794 p. 215-228 2012
-
Wide-range protein photo-crosslinking achieved by a genetically encoded N-epsilon-(benzyloxycarbonyl)lysine derivative with a diazirinyl moiety
Tatsuo Yanagisawa, Nobumasa Hino, Fumie Iraha, Takahito Mukai, Kensaku Sakamoto, Shigeyuki Yokoyama
MOLECULAR BIOSYSTEMS Vol. 8 No. 4 p. 1131-1135 2012 Research paper (scientific journal)
-
Genetic-code evolution for protein synthesis with non-natural amino acids
Takahito Mukai, Tatsuo Yanagisawa, Kazumasa Ohtake, Masatoshi Wakamori, Jiro Adachi, Nobumasa Hino, Aya Sato, Takatsugu Kobayashi, Akiko Hayashi, Mikako Shirouzu, Takashi Umehara, Shigeyuki Yokoyama, Kensaku Sakamoto
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS Vol. 411 No. 4 p. 757-761 2011/08 Research paper (scientific journal)
-
Dissecting Cell Signaling Pathways with Genetically Encoded 3-Iodo-L-tyrosine
Akiko Hayashi, Nobumasa Hino, Takatsugu Kobayashi, Ryoichi Arai, Mikako Shirouzu, Shigeyuki Yokoyama, Kensaku Sakamoto
CHEMBIOCHEM Vol. 12 No. 3 p. 387-389 2011/02 Research paper (scientific journal)
-
Genetic Incorporation of a Photo-Crosslinkable Amino Acid Reveals Novel Protein Complexes with GRB2 in Mammalian Cells
Nobumasa Hino, Masaaki Oyama, Aya Sato, Takahito Mukai, Fumie Iraha, Akiko Hayashi, Hiroko Kozuka-Hata, Tadashi Yamamoto, Shigeyuki Yokoyama, Kensaku Sakamoto
JOURNAL OF MOLECULAR BIOLOGY Vol. 406 No. 2 p. 343-353 2011/02 Research paper (scientific journal)
-
Dissecting Cell Signaling Pathways with Genetically Encoded 3-Iodo-L-tyrosine
Akiko Hayashi, Nobumasa Hino, Takatsugu Kobayashi, Ryoichi Arai, Mikako Shirouzu, Shigeyuki Yokoyama, Kensaku Sakamoto
CHEMBIOCHEM Vol. 12 No. 3 p. 387-389 2011/02 Research paper (scientific journal)
-
Crystallographic Study of a Site-Specifically Cross-Linked Protein Complex with a Genetically Incorporated Photoreactive Amino Acid
Shin Sato, Shinya Mimasu, Aya Sato, Nobumasa Hino, Kensaku Sakamoto, Takashi Umehara, Shigeyuki Yokoyama
BIOCHEMISTRY Vol. 50 No. 2 p. 250-257 2011/01 Research paper (scientific journal)
-
Crystal structure of bacterial RNA polymerase bound with a transcription inhibitor protein
Shunsuke Tagami, Shun-ichi Sekine, Thirumananseri Kumarevel, Nobumasa Hino, Yuko Murayama, Syunsuke Kamegamori, Masaki Yamamoto, Kensaku Sakamoto, Shigeyuki Yokoyama
NATURE Vol. 468 No. 7326 p. 978-U282 2010/12 Research paper (scientific journal)
-
Adding L-lysine derivatives to the genetic code of mammalian cells with engineered pyrrolysyl-tRNA synthetases
Takahito Mukai, Takatsugu Kobayashi, Nobumasa Hino, Tatsuo Yanagisawa, Kensaku Sakamoto, Shigeyuki Yokoyama
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS Vol. 371 No. 4 p. 818-822 2008/07 Research paper (scientific journal)
-
Site-specific incorporation of non-natural amino acids into proteins in mammalian cells with an expanded genetic code
Nobumasa Hino, Akiko Hayashi, Kensaku Sakamoto, Shigeyuki Yokoyama
NATURE PROTOCOLS Vol. 1 No. 6 p. 2957-2962 2006 Research paper (scientific journal)
-
Protein photo-cross-tin king in mammalian cells by site-specific incorporation of a photoreactive amino acid
Nobumasa Hino, Yuko Okazaki, Takatsugu Kobayashi, Akiko Hayashi, Kensaku Sakamoto, Sigeyuki Yokoyama
NATURE METHODS Vol. 2 No. 3 p. 201-206 2005/03 Research paper (scientific journal)
-
Hepatitis C virus core protein binds to a C-terminal region of NS5B RNA polymerase
M Uchida, N Hino, T Yamanaka, H Fukushima, T Imanishi, Y Uchiyama, T Kodama, T Doi
HEPATOLOGY RESEARCH Vol. 22 No. 4 p. 297-306 2002/04 Research paper (scientific journal)