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Synaptotagmin 4 supports spontaneous axon sprouting after spinal cord injury
Kyoka Higuchi, Akiko Uyeda, Lili Quan, Shogo Tanabe, Yuki Kato, Yukio Kawahara, Rieko Muramatsu
The Journal of Neuroscience 2024/09/12 Research paper (scientific journal)
Publisher: Society for Neuroscience
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A cancer-associated METTL14 mutation induces aberrant m6A modification, affecting tumor growth
Kotaro Miyake, Pedro Henrique Costa Cruz, Izumi Nagatomo, Yuki Kato, Daisuke Motooka, Shingo Satoh, Yuichi Adachi, Yoshito Takeda, Yukio Kawahara, Atsushi Kumanogoh
Cell Reports Vol. 42 No. 7 p. 112688-112688 2023/06 Research paper (scientific journal)
Publisher: Elsevier BV
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RNA editing of AZIN1 coding sites is catalyzed by ADAR1 p150 after splicing
Yanfang Xing, Taisuke Nakahama, Yuke Wu, Maal Inoue, Jung In Kim, Hiroyuki Todo, Toshiharu Shibuya, Yuki Kato, Yukio Kawahara
Journal of Biological Chemistry Vol. 299 No. 7 p. 104840-104840 2023/05 Research paper (scientific journal)
Publisher: Elsevier BV
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The RNA-editing enzyme ADAR1: a regulatory hub that tunes multiple dsRNA-sensing pathways
Taisuke Nakahama, Yukio Kawahara
International Immunology Vol. 35 No. 3 p. 123-133 2022/12/05 Research paper (scientific journal)
Publisher: Oxford University Press (OUP)
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The N6-methyladenosine methyltransferase METTL16 enables erythropoiesis through safeguarding genome integrity
Masanori Yoshinaga, Kyuho Han, David W. Morgens, Takuro Horii, Ryosuke Kobayashi, Tatsuaki Tsuruyama, Fabian Hia, Shota Yasukura, Asako Kajiya, Ting Cai, Pedro H. C. Cruz, Alexis Vandenbon, Yutaka Suzuki, Yukio Kawahara, Izuho Hatada, Michael C. Bassik, Osamu Takeuchi
Nature Communications Vol. 13 No. 1 p. 6435-6435 2022/10/28 Research paper (scientific journal)
Publisher: Springer Science and Business Media LLC
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Alignment of single-cell trajectory trees with CAPITAL
Reiichi Sugihara, Yuki Kato, Tomoya Mori, Yukio Kawahara
Nature Communications Vol. 13 No. 1 2022/10/14 Research paper (scientific journal)
Publisher: Springer Science and Business Media LLC
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An Aicardi-Goutières Syndrome–Causative Point Mutation in Adar1 Gene Invokes Multiorgan Inflammation and Late-Onset Encephalopathy in Mice
Maal Inoue, Taisuke Nakahama, Ryuichiro Yamasaki, Toshiharu Shibuya, Jung In Kim, Hiroyuki Todo, Yanfang Xing, Yuki Kato, Eiichi Morii, Yukio Kawahara
The Journal of Immunology Vol. 207 No. 12 p. 3016-3027 2021/11/12 Research paper (scientific journal)
Publisher: The American Association of Immunologists
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Deciphering the Biological Significance of ADAR1–Z-RNA Interactions
Taisuke Nakahama, Yukio Kawahara
International Journal of Molecular Sciences Vol. 22 No. 21 2021/10 Research paper (scientific journal)
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Mutations in the adenosine deaminase ADAR1 that prevent endogenous Z-RNA binding induce Aicardi-Goutières-syndrome-like encephalopathy
Taisuke Nakahama, Yuki Kato, Toshiharu Shibuya, Maal Inoue, Jung In Kim, Tuangtong Vongpipatana, Hiroyuki Todo, Yanfang Xing, Yukio Kawahara
Immunity Vol. 54 No. 9 p. 1976-1988.e7 2021/09 Research paper (scientific journal)
Publisher: Elsevier BV
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Dimethylarginine dimethylaminohydrolase 1 as a novel regulator of oligodendrocyte differentiation in the central nervous system remyelination
Akiko Uyeda, Lili Quan, Yuki Kato, Nagaaki Muramatsu, Shogo Tanabe, Kazuhisa Sakai, Noritaka Ichinohe, Yukio Kawahara, Tatsunori Suzuki, Rieko Muramatsu
Glia Vol. 69 No. 11 p. 2591-2604 2021/07/16 Research paper (scientific journal)
Publisher: Wiley
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RNA editing at a limited number of sites is sufficient to prevent MDA5 activation in the mouse brain
Jung In Kim, Taisuke Nakahama, Ryuichiro Yamasaki, Pedro Henrique Costa Cruz, Tuangtong Vongpipatana, Maal Inoue, Nao Kanou, Yanfang Xing, Hiroyuki Todo, Toshiharu Shibuya, Yuki Kato, Yukio Kawahara
PLOS Genetics Vol. 17 No. 5 p. e1009516-e1009516 2021/05/13 Research paper (scientific journal)
Publisher: Public Library of Science (PLoS)
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Age-dependent decline in remyelination capacity is mediated by apelin–APJ signaling
Masumi Ito, Rieko Muramatsu, Yuki Kato, Bikram Sharma, Akiko Uyeda, Shogo Tanabe, Harutoshi Fujimura, Hiroyasu Kidoya, Nobuyuki Takakura, Yukio Kawahara, Masaki Takao, Hideki Mochizuki, Akiyoshi Fukamizu, Toshihide Yamashita
Nature Aging Vol. 1 No. 3 p. 284-294 2021/03 Research paper (scientific journal)
Publisher: Springer Science and Business Media LLC
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RNA Editing in Neurological and Neurodegenerative Disorders
Pedro Henrique Costa Cruz, Yukio Kawahara
Methods in Molecular Biology Vol. 2181 p. 309-330 2021 Part of collection (book)
Publisher: Springer US
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ADAR1 Regulates Early T Cell Development via MDA5-Dependent and -Independent Pathways.
Vongpipatana T, Nakahama T, Shibuya T, Kato Y, Kawahara Y
The Journal of Immunology Vol. 204 No. 8 p. 2156-2168 2020/03/13 Research paper (scientific journal)
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Adenosine-to-inosine RNA editing in the immune system: friend or foe?
Taisuke Nakahama, Yukio Kawahara
Cellular and Molecular Life Sciences Vol. 77 No. 15 p. 2931-2948 2020/01/29 Research paper (scientific journal)
Publisher: Springer Science and Business Media LLC
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Bivartect: accurate and memory-saving breakpoint detection by direct read comparison
Keisuke Shimmura, Yuki Kato, Yukio Kawahara
Bioinformatics Vol. 36 No. 9 p. 2725-2730 2020/01/27 Research paper (scientific journal)
Publisher: Oxford University Press (OUP)
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A comparative analysis of ADAR mutant mice reveals site-specific regulation of RNA editing
Pedro Henrique Costa Cruz, Yuki Kato, Taisuke Nakahama, Toshiharu Shibuya, Yukio Kawahara
RNA Vol. 26 No. 4 p. 454-469 2020/01/15 Research paper (scientific journal)
Publisher: Cold Spring Harbor Laboratory
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ADAR1-mediated RNA editing is required for thymic self-tolerance and inhibition of autoimmunity.
Taisuke Nakahama, Yuki Kato, Jung In Kim, Tuangtong Vongpipatana, Yutaka Suzuki, Carl R Walkley, Yukio Kawahara
EMBO reports Vol. 19 No. 12 2018/12 Research paper (scientific journal)
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Quantification of methylation efficiency at a specific N6-methyladenosine position in rRNA by using BNA probes.
Oshima T, Ishiguro K, Suzuki T, Kawahara Y
Chemical Communications (Camb) Vol. 54 No. 69 p. 9627-9630 2018/08 Research paper (scientific journal)
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Myotube-derived factor promotes oligodendrocyte precursor cell proliferation
Akino Nakasone, Rieko Muramatsu, Yuki Kato, Yukio Kawahara, Toshihide Yamashita
Biochemical and Biophysical Research Communications Vol. 500 No. 3 p. 609-613 2018/06/07 Research paper (scientific journal)
Publisher: Elsevier B.V.
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RNA editing independently occurs at three mir-376a-1 sites and may compromise the stability of the microRNA hairpin
Alicia Gallego, Diego A. Hartasanchez, Marina Braso-Vives, Eva Garcia-Ramallo, Maria Lopez-Valenzuela, Neus Baena, Miriam Guitart, Hugo Fernandez-Bellon, Ivanela Kondova, Ronald Bontrop, Yukio Kawahara, Yolanda Espinosa-Parrilla
GENE Vol. 628 p. 109-116 2017/09 Research paper (scientific journal)
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Matrin3 binds directly to intronic pyrimidine-rich sequences and controls alternative splicing
Yuri Uemura, Takuya Oshima, Munetaka Yamamoto, Charles Jourdan Reyes, Pedro Henrique Costa Cruz, Toshiharu Shibuya, Yukio Kawahara
GENES TO CELLS Vol. 22 No. 9 p. 785-798 2017/09 Research paper (scientific journal)
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The RNA-binding protein MARF1 promotes cortical neurogenesis through its RNase activity domain
Yoshitaka Kanemitsu, Masashi Fujitani, Yuki Fujita, Suxiang Zhang, You-Qiang Su, Yukio Kawahara, Toshihide Yamashita
SCIENTIFIC REPORTS Vol. 7 No. 1 2017/04 Research paper (scientific journal)
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CAPS1 RNA Editing Promotes Dense Core Vesicle Exocytosis
Kotaro Miyake, Toshio Ohta, Hisako Nakayama, Nobutaka Doe, Yuri Terao, Eiji Oiki, Izumi Nagatomo, Yui Yamashita, Takaya Abe, Kazuko Nishikura, Atsushi Kumanogoh, Kouichi Hashimoto, Yukio Kawahara
CELL REPORTS Vol. 17 No. 8 p. 2004-2014 2016/11 Research paper (scientific journal)
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Cross-Linking and Immunopresipitation of Nuclear RNA-Binding Proteins.
Li, Q, Uemura, Y, Kawahara, Y
Methods in Molecular Biology Vol. 1262 p. 247-263 2015/01 Research paper (scientific journal)
Publisher: Springer社
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The cleavage pattern of TDP-43 determines its rate of clearance and cytotoxicity
Quan Li, Moe Yokoshi, Hitomi Okada, Yukio Kawahara
Nature Communications Vol. 6 2015/01 Research paper (scientific journal)
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Direct Binding of Ataxin-2 to Distinct Elements in 3 ' UTRs Promotes mRNA Stability and Protein Expression
Moe Yokoshi, Quan Li, Munetaka Yamamoto, Hitomi Okada, Yutaka Suzuki, Yukio Kawahara
MOLECULAR CELL Vol. 55 No. 2 p. 186-198 2014/07 Research paper (scientific journal)
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Human diseases caused by germline and somatic abnormalities in microRNA and microRNA-related genes
Yukio Kawahara
CONGENITAL ANOMALIES Vol. 54 No. 1 p. 12-21 2014/02 Research paper (scientific journal)
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Aryl hydrocarbon receptor-mediated induction of the microRNA-132/212 cluster promotes interleukin-17-producing T-helper cell differentiation
Taisuke Nakahama, Hamza Hanieh, Nam Trung Nguyen, Ichino Chinen, Barry Ripley, David Millrine, Soyoung Lee, Kishan Kumar Nyati, Praveen Kumar Dubey, Kamal Chowdhury, Yukio Kawahara, Tadamitsu Kishimoto
Proceedings of the National Academy of Sciences of the United States of America Vol. 110 No. 29 p. 11964-11969 2013/07/16 Research paper (scientific journal)
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Circulating p53-responsive MicroRNAs are predictive indicators of heart failure after acute myocardial infarction
Matsumoto, S., Sakata, Y., Suna, S., Nakatani, D., Usami, M., Hara, M., Kitamura, T., Hamasaki, T., Nanto, S., Kawahara, Y., Komuro, I.
Circulation Research Vol. 113 No. 3 p. 322-326 2013 Research paper (scientific journal)
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Tissue- and plasma-specific MicroRNA signatures for atherosclerotic abdominal aortic aneurysm.
Keiwa Kin, Shigeru Miyagawa, Satsuki Fukushima, Yukitoshi Shirakawa, Kei Torikai, Kazuo Shimamura, Takashi Daimon, Yukio Kawahara, Toru Kuratani, Yoshiki Sawa
Journal of the American Heart Association Vol. 1 No. 5 2012/10 Research paper (scientific journal)
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A subset of circulating microRNAs are predictive for cardiac death after discharge for acute myocardial infarction
Sen Matsumoto, Yasuhiko Sakata, Daisaku Nakatani, Shinichiro Suna, Hiroya Mizuno, Masahiko Shimizu, Masaya Usami, Tatsuya Sasaki, Hiroshi Sato, Yukio Kawahara, Toshimitsu Hamasaki, Shinsuke Nanto, Masatsugu Hori, Issei Komuro
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS Vol. 427 No. 2 p. 280-284 2012/10 Research paper (scientific journal)
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Quantification of adenosine-to-inosine editing of microRNAs using a conventional method
Yukio Kawahara
NATURE PROTOCOLS Vol. 7 No. 7 p. 1426-1437 2012/07 Research paper (scientific journal)
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TDP-43 promotes microRNA biogenesis as a component of the Drosha and Dicer complexes
Yukio Kawahara, Ai Mieda-Sato
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA Vol. 109 No. 9 p. 3347-3352 2012/02 Research paper (scientific journal)
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Functional relevance of serotonin 2C receptor mRNA editing in antidepressant- and anxiety-like behaviors
Cedric Mombereau, Yukio Kawahara, Brigitta B. Gundersen, Kazuko Nishikura, Julie A. Blendy
NEUROPHARMACOLOGY Vol. 59 No. 6 p. 468-473 2010/11 Research paper (scientific journal)
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Dysregulated Editing of Serotonin 2C Receptor mRNAs Results in Energy Dissipation and Loss of Fat Mass
Yukio Kawahara, Adda Grimberg, Sarah Teegarden, Cedric Mombereau, Sui Liu, Tracy L. Bale, Julie A. Blendy, Kazuko Nishikura
JOURNAL OF NEUROSCIENCE Vol. 28 No. 48 p. 12834-12844 2008/11 Research paper (scientific journal)
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Frequency and fate of microRNA editing in human brain
Yukio Kawahara, Molly Megraw, Edward Kreider, Hisashi Iizasa, Louis Valente, Artemis G. Hatzigeorgiou, Kazuko Nishikura
NUCLEIC ACIDS RESEARCH Vol. 36 No. 16 p. 5270-5280 2008/09 Research paper (scientific journal)
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RNA editing of the microRNA-151 precursor blocks cleavage by the Dicer-TRBP complex
Yukio Kawahara, Boris Zinshteyn, Thimmaiah P. Chendrimada, Ramin Shiekhattar, Kazuko Nishikura
EMBO REPORTS Vol. 8 No. 8 p. 763-769 2007/08 Research paper (scientific journal)
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Redirection of silencing targets by adenosine-to-inosine editing of miRNAs
Yukio Kawahara, Boris Zinshteyn, Praveen Sethupathy, Hisashi Iizasa, Artemis G. Hatzigeorgiou, Kazuko Nishikura
SCIENCE Vol. 315 No. 5815 p. 1137-1140 2007/02 Research paper (scientific journal)
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Slow and selective death of spinal motor neurons in vivo by intrathecal infusion of kainic acid: implications for AMPA receptor-mediated excitotoxicity in ALS
Hui Sun, Yukio Kawahara, Kyoko Ito, Ichiro Kanazawa, Shin Kwak
JOURNAL OF NEUROCHEMISTRY Vol. 98 No. 3 p. 782-791 2006/08 Research paper (scientific journal)
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Extensive adenosine-to-inosine editing detected in Alu repeats of antisense RNAs reveals scarcity of sense-antisense duplex formation
Y Kawahara, K Nishikura
FEBS LETTERS Vol. 580 No. 9 p. 2301-2305 2006/04 Research paper (scientific journal)
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A-to-I RNA Editing and Human Disease
Maas S, Kawahara Y, Tamburro KM, Nishikura K
RNA Biol Vol. 3 p. e1-e9 2006 Research paper (scientific journal)
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Underediting of GluR2 mRNA, a neuronal death inducing molecular change in sporadic ALS, does not occur in motor neurons in ALS1 or SBMA
Y Kawahara, H Sun, K Ito, T Hideyama, M Aoki, G Sobue, S Tsuji, S Kwak
NEUROSCIENCE RESEARCH Vol. 54 No. 1 p. 11-14 2006/01 Research paper (scientific journal)
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Novel splice variants of human ADAR2 mRNA: Skipping of the exon encoding the dsRNA-binding domains, and multiple C-terminal splice sites
Y Kawahara, K Ito, M Ito, S Tsuji, S Kwak
GENE Vol. 363 p. 193-201 2005/12 Research paper (scientific journal)
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Excitotoxicity and ALS: What is unique about the AMPA receptors expressed on spinal motor neurons?
Y Kawahara, S Kwak
AMYOTROPHIC LATERAL SCLEROSIS AND OTHER MOTOR NEURON DISORDERS Vol. 6 No. 3 p. 131-144 2005/09 Research paper (scientific journal)
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Expression profile of AMPA receptor subunit mRNA in single adult rat brain and spinal cord neurons in situ
H Sun, Y Kawahara, K Ito, Kanazawa, I, S Kwak
NEUROSCIENCE RESEARCH Vol. 52 No. 3 p. 228-234 2005/07 Research paper (scientific journal)
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Deficient RNA editing of GluR2 and neuronal death in amyotropic lateral sclerosis
S Kwak, Y Kawahara
JOURNAL OF MOLECULAR MEDICINE-JMM Vol. 83 No. 2 p. 110-120 2005/02 Research paper (scientific journal)
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GluR4c, an alternative splicing isoform of GluR4, expressed in the adult human brain* is abundantly
Y Kawahara, K Ito, H Sun, M Ito, Kanazawa, I, S Kwak
MOLECULAR BRAIN RESEARCH Vol. 127 No. 1-2 p. 150-155 2004/08 Research paper (scientific journal)
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Glutamate receptors: RNA editing and death of motor neurons
Y Kawahara, K Ito, H Sun, H Aizawa, Kanazawa, I, S Kwak
NATURE Vol. 427 No. 6977 p. 801-801 2004/02 Research paper (scientific journal)
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Regulation of glutamate receptor RNA editing and ADAR mRNA expression in developing human normal and Down's syndrome brains
Y Kawahara, K Ito, H Sun, M Ito, Kanazawa, I, S Kwak
DEVELOPMENTAL BRAIN RESEARCH Vol. 148 No. 1 p. 151-155 2004/01 Research paper (scientific journal)
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Low editing efficiency of GluR2 mRNA is associated with a low relative abundance of ADAR2 mRNA in white matter of normal human brain
Y Kawahara, K Ito, H Sun, Kanazawa, I, S Kwak
EUROPEAN JOURNAL OF NEUROSCIENCE Vol. 18 No. 1 p. 23-33 2003/07 Research paper (scientific journal)
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Human spinal motoneurons express low relative abundance of GluR2 mRNA: an implication for excitotoxicity in ALS
Y Kawahara, S Kwak, H Sun, K Ito, H Hashida, H Aizawa, SY Jeong, Kanazawa, I
JOURNAL OF NEUROCHEMISTRY Vol. 85 No. 3 p. 680-689 2003/05 Research paper (scientific journal)
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Motor cortical reflex myoclonus: a case study with MEG
Yasuo Terao, Yoshikazu Ugawa, Ritsuko Hanajima, Masato Yumoto, Yukio Kawahara, Tomotaka Yamamoto, Ichiro Shirouzu, Ichiro Kanazawa
Electroencephalography and Clinical Neurophysiology Vol. 102 No. 6 p. 505-511 1997/06 Research paper (scientific journal)
Publisher: Elsevier BV