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Lazy Qubit Reordering for Accelerating Parallel State-Vector-based Quantum Circuit Simulation
Yusuke Teranishi, Shoma Hiraoka, Wataru Mizukami, Masao Okita, Fumihiko Ino
ACM Transactions on Quantum Computing 2025/07/12 Research paper (scientific journal)
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Overlapping Aware Data Placement Optimizations for LSM Tree-Based Store on ZNS SSDs
Jingcheng Shen, Lang Yang, Linbo Long, Zhenhua Tan, Congming Gao, Kan Zhong, Masao Okita, Fumihiko Ino
ACM Transactions on Architecture and Code Optimization 2025/03/04 Research paper (scientific journal)
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A compression-based memory-efficient optimization for out-of-core GPU stencil computation.
Jingcheng Shen, Linbo Long, Xin Deng, Masao Okita, Fumihiko Ino
The Journal of Supercomputing Vol. 79 No. 10 p. 11055-11077 2023/07 Research paper (scientific journal)
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Accelerating Imbalanced Many-to-Many Communication with Systematic Delay Insertion.
Hirotoshi Yamada, Masao Okita, Fumihiko Ino
PDCAT p. 426-437 2022/12 Research paper (international conference proceedings)
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Accelerating a Lossy Compression Method with Fine-Grained Parallelism on a GPU.
Yifan Wu, Jingcheng Shen, Masao Okita, Fumihiko Ino
12th International Symposium on Parallel Architectures, Algorithms and Programming(PAAP) p. 76-81 2021/12 Research paper (international conference proceedings)
Publisher: IEEE
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Accelerating GPU-Based Out-of-Core Stencil Computation with On-the-Fly Compression.
Jingcheng Shen, Yifan Wu, Masao Okita, Fumihiko Ino
Parallel and Distributed Computing, Applications and Technologies - 22nd International Conference(PDCAT) p. 3-14 2021 Research paper (international conference proceedings)
Publisher: Springer
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Accelerating In-Transit Co-Processing for Scientific Simulations Using Region-Based Data-Driven Analysis.
Marcus Wallden, Masao Okita, Fumihiko Ino, Dimitris Drikakis, Ioannis Kokkinakis
Algorithms Vol. 14 No. 5 p. 154-154 2021 Research paper (scientific journal)
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Accelerating Human Genome Phenotypic Analysis with Bitwise Search and Batched Computation.
Yuichiro Miyamoto, Masao Okita, Fumihiko Ino
28th Euromicro International Conference on Parallel, Distributed and Network-Based Processing(PDP) p. 258-265 2020/03 Research paper (international conference proceedings)
Publisher: IEEE
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Transparent In-memory Cache Management in Apache Spark based on Post-Mortem Analysis.
Atsuya Nasu, Kenji Yoneo, Masao Okita, Fumihiko Ino
2019 IEEE International Conference on Big Data (IEEE BigData) p. 3388-3396 2019 Research paper (international conference proceedings)
Publisher: IEEE
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Memory Efficient Load Balancing for Distributed Large-Scale Volume Rendering Using a Two-layered Group Structure
Marcus Wallden, Stefano Markidis, Masao Okita, Fumihiko Ino
IEICE Transactions on Information and Systems Vol. E102-D No. 12 p. 2306-2316 2019 Research paper (scientific journal)
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Accelerating the Held-Karp Algorithm for the Symmetric Traveling Salesman Problem
Kazuro Kimura, Shinya Higa, Masao Okita, Fumihiko Ino
IEICE Transactions on Information and Systems Vol. E102-D No. 12 p. 2329-2340 2019 Research paper (scientific journal)
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Transparent Avoidance of Redundant Data Transfer on GPU-enabled Apache Spark.
Ryo Asai, Masao Okita, Fumihiko Ino, Kenichi Hagihara
Proceedings of the 11th Workshop on General Purpose Processing Using GPU (GPGPU 2018) p. 22-30 2018 Research paper (international conference proceedings)
Publisher: ACM
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A Versatile Platform for Multilevel Modeling of Physiological Systems: SBML-PHML Hybrid Modeling and Simulation
ASAI Yoshiyuki, KITANO Hiroaki, ABE Takeshi, OKA Hideki, OKITA Masao, HAGIHARA Ken-ichi, GHOSH Samik, MATSUOKA Yukiko, KURACHI Yoshihisa, NOMURA Taishin
Advanced Biomedical Engineering Vol. 3 No. 0 p. 50-58 2014 Research paper (scientific journal)
Publisher: Japanese Society for Medical and Biological Engineering
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Accelerating ODE-Based Simulation of General and Heterogeneous Biophysical Models Using a GPU
Tomohiro Okuyama, Masao Okita, Takeshi Abe, Yoshiyuki Asai, Hiroaki Kitano, Taishin Nomura, Kenichi Hagihara
IEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS Vol. 25 No. 8 p. 1966-1975 2014 Research paper (scientific journal)
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A High-Throughput SHA-1 Computation System by SSE Instructions for Deduplication Storage
Yuki Tsubouchi, Fumihiko Ino, Masao Okita, Satoshi Yamakawa, Takehiko Kashiwagi, Kenichi Hagihara
Transactions of IEICE Vol. 96 No. 10 p. 2101-2109 2013 Research paper (scientific journal)
Publisher: The Institute of Electronics, Information and Communication Engineers
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PhysioDesigner and Flint: a platform for multilevel modeling of physiological systems and simulation
Proceedings of 5th the International Conference on Computational Bioengineering (ICCB 2013) 2013 Research paper (other academic)
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Multilevel modeling of Physiological Systems and Simulation Platform: PhysioDesigner, Flint and Flint K3 service
Yoshiyuki Asai, Takeshi Abe, Masao Okita, Tomohiro Okuyama, Nobukazu Yoshioka, Shigetsohi Yokoyama, Masaru Nagaku, Ken-ichi Hagihara, Hiroaki Kitano
2012 IEEE/IPSJ 12TH INTERNATIONAL SYMPOSIUM ON APPLICATIONS AND THE INTERNET (SAINT) p. 215-219 2012 Research paper (international conference proceedings)
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An Open Platform toward Large-Scale Multilevel Modeling and Simulation of Physiological Systems.
Yoshiyuki Asai, Hideki Oka, Takeshi Abe, Masao Okita, Kenichi Hagihara, Taishin Nomura, Hiroaki Kitano
11th Annual International Symposium on Applications and the Internet, SAINT 2011, Munich, Germany, 18-21 July, 2011, Proceedings p. 250-255 2011
Publisher: IEEE Computer Society
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insilicoSim: an extendable engine for parallel heterogeneous biophysical simulations.
Eric Martin Heien, Masao Okita, Yoshiyuki Asai, Taishin Nomura, Kenichi Hagihara
3rd International Conference on Simulation Tools and Techniques, SIMUTools '10, Malaga, Spain - March 16 - 18, 2010 2010
Publisher: ICST/ACM
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Large-Scale Trace Generation for Performance Analysis of Message Passing Parallel Programs
IPSJ Transactions on Advanced Computing Systems Vol. Vol.47, No.SIG7(ACS14), pp.1-11 2006
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Trace Reduction for Performance Improvement Assessment of Message Passing Parallel Programs
Systems and Computers in Japan Vol. Vol.37, No.5, pp.1-13 2006
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PerWiz: A what-if prediction tool for tuning message passing programs
F Ino, Y Kanbe, M Okita, K Hagihara
HIGH PERFORMANCE COMPUTING FOR COMPUTATIONAL SCIENCE - VECPAR 2004 Vol. 3402 p. 396-409 2005 Research paper (scientific journal)
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Trace Reduction for Performance Improvement Assessment of Message Passing Parallel Programs
Transactions of IEICE Vol. Vol.J88-D-I, No.4, pp.780-790 2005
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A Performance Prediction Tool for Evaluating Potential Improvement of Message Passing Programs
IPSJ Transactions on Advanced Computing Systems Vol. Vol.44, No.SIG11(ACS3), pp.101-110 2003
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MPI-PreDebugger: A Debugging Support Tool for Message-passing Parallel Programs via Communication Dependency Analysis
OKITA MASAO, INO FUMIHIKO, FUJIMOTO NORIYUKI, HAGIHARA KENICHI
IPSJ Transactions on High Performance Computing Systems Vol. Vol.43, No.SIG6(HPS5), pp.88-98 No. 5 p. 88-98 2002
Publisher: Information Processing Society of Japan (IPSJ)