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Matsuda Fumio

松田 史生

Graduate School of Information Science and Technology Department of Bioinformatic Engineering, Professor

Education

  • - 2002, Kyoto University
  • - 2002, Kyoto University, Graduate School, Division of Agriculture

Research Areas

  • Life sciences, Systems genomics
  • Manufacturing technology (mechanical, electrical/electronic, chemical engineering), Applied biofunctional and bioprocess engineering
  • Life sciences, Bioorganic chemistry

Professional Memberships

  • 日本分子生物学会
  • 日本植物バイオテクノロジー学会
  • 日本質量分析学会
  • 日本生物工学会
  • 日本農芸化学会
  • 日本植物生理学会
  • 日本農薬学会

Papers

  • Metabolome analysis of metabolic burden in Escherichia coli caused by overexpression of green fluorescent protein and delta-rhodopsin, Chinatsu Matsuyama,Taisuke Seike,Nobuyuki Okahashi,Teppei Niide,Kiyotaka Y. Hara,Yoko Hirono-Hara,Jun Ishii,Hiroshi Shimizu,Yoshihiro Toya,Fumio Matsuda, Journal of Bioscience and Bioengineering, 2024/03
  • Development of <sup>13</sup>C-Metabolic Flux Analysis for HL-60 Neutrophil-like Cell Using GC-MS, Takeo Taniguchi,Nobuyuki Okahashi,Fumio Matsuda, Journal of the Mass Spectrometry Society of Japan, The Mass Spectrometry Society of Japan, Vol. 71, No. 4, p. 155-159, 2023/12/01
  • Improved 2,3-Butanediol Production Rate of Metabolically Engineered Saccharomyces cerevisiae by Deletion of RIM15 and Activation of Pyruvate Consumption Pathway, Masahiko Sugimura,Taisuke Seike,Nobuyuki Okahashi,Yoshihiro Izumi,Takeshi Bamba,Jun Ishii,Fumio Matsuda, International Journal of Molecular Sciences, MDPI AG, Vol. 24, No. 22, p. 16378-16378, 2023/11/15
  • Lipidome and metabolome analyses reveal metabolic alterations associated with MCF-7 apoptosis upon 4-hydroxytamoxifen treatment, Kazuki Nishimoto,Nobuyuki Okahashi,Masaharu Maruyama,Yoshihiro Izumi,Kohta Nakatani,Yuki Ito,Junko Iida,Takeshi Bamba,Fumio Matsuda, Scientific Reports, Springer Science and Business Media LLC, Vol. 13, No. 1, 2023/10/29
  • Improvement of ethanol and 2,3-butanediol production in Saccharomyces cerevisiae by ATP wasting, Futa Yatabe,Taisuke Seike,Nobuyuki Okahashi,Jun Ishii,Fumio Matsuda, Microbial Cell Factories, Springer Science and Business Media LLC, Vol. 22, No. 1, 2023/10/08
  • Comprehensive analysis of the composition of the major phospholipids during the asexual life cycle of the filamentous fungus Aspergillus nidulans, Ryo Iwama,Nobuyuki Okahashi,Tetsuki Suzawa,Chuner Yang,Fumio Matsuda,Hiroyuki Horiuchi, Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids, Elsevier BV, p. 159379-159379, 2023/08
  • Effects of n-butanol production on metabolism and the photosystem in Synecococcus elongatus PCC 7942 based on metabolic flux and target proteome analyses., Keisuke Wada,Kiyoka Uebayashi,Yoshihiro Toya,Sastia Prama Putri,Fumio Matsuda,Eiichiro Fukusaki,James C Liao,Hiroshi Shimizu, The Journal of general and applied microbiology, 2023/03/20
  • Wickerhamiella bidentis sp. nov., a novel yeast species isolated from flowers and insects in Japan., Taisuke Seike,Hiroki Takekata,Yui Uchida,Natsue Sakata,Chikara Furusawa,Fumio Matsuda, International journal of systematic and evolutionary microbiology, Vol. 73, No. 3, 2023/03
  • Simple and Rapid Non-ribosomal Peptide Synthetase Gene Assembly Using the SEAM–OGAB Method, Varada Jagadeesh,Takanobu Yoshida,Misugi Uraji,Nobuyuki Okahashi,Fumio Matsuda,Christopher J. Vavricka,Kenji Tsuge,Akihiko Kondo, ACS Synthetic Biology, American Chemical Society (ACS), 2022/12/23
  • Data Processing of Product Ion Spectra: Quality Improvement by Averaging Multiple Similar Spectra of Small Molecules, Fumio Matsuda,Shuka Komori,Yuki Yamada,Daiki Hara,Nobuyuki Okahashi, Mass Spectrometry, The Mass Spectrometry Society of Japan, Vol. 11, No. 1, p. A0106-A0106, 2022/12/15
  • <sup>13</sup>C-tracer Analysis of Phospholipids by LC-QTOF/MS, Yuki Yamada,Keita Murakami,Nobuyuki Okahashi,Atsuhiko Toyama,Junko Iida,Fumio Matsuda, Journal of the Mass Spectrometry Society of Japan, The Mass Spectrometry Society of Japan, Vol. 70, No. 4, p. 241-244, 2022/12/01
  • Lipidome variation of industrial Saccharomyces cerevisiae strains analyzed by LC-QTOF/MS-based untargeted lipidomics, Shuka Komori,Nobuyuki Okahashi,Junko Iida,Fumio Matsuda, Journal of Bioscience and Bioengineering, Elsevier BV, 2022/12
  • Conversion of Mevalonate to Isoprenol Using Light Energy in Escherichia coli without Consuming Sugars for ATP Supply., Mikoto Sano,Ryo Tanaka,Kentaro Kamata,Yoko Hirono-Hara,Jun Ishii,Fumio Matsuda,Kiyotaka Y Hara,Hiroshi Shimizu,Yoshihiro Toya, ACS synthetic biology, Vol. 11, No. 12, p. 3966-3972, 2022/11/28
  • Evolutionary approach for improved proton pumping activity of heterologous rhodopsin expressed in Escherichia coli., Kensuke Otsuka,Taisuke Seike,Yoshihiro Toya,Jun Ishii,Yoko Hirono-Hara,Kiyotaka Y Hara,Fumio Matsuda, Journal of bioscience and bioengineering, Vol. 134, No. 6, p. 484-490, 2022/09/25
  • 13C metabolic flux analysis clarifies distinct metabolic phenotypes of cancer cell spheroid mimicking tumor hypoxia., Shingo Noguchi,Kenichi Wakita,Fumio Matsuda,Hiroshi Shimizu, Metabolic engineering, Vol. 73, p. 192-200, 2022/07/31
  • Isotope Calculation Gadgets: A Series of Software for Isotope-Tracing Experiments in Garuda Platform, Nobuyuki Okahashi,Yuki Yamada,Junko Iida,Fumio Matsuda, Metabolites, MDPI AG, Vol. 12, No. 7, p. 646-646, 2022/07/14
  • Constitutive expression of the global regulator AbrB restores the growth defect of a genome-reduced Bacillus subtilis strain and improves its metabolite production., Junya Yamamoto,Onuma Chumsakul,Yoshihiro Toya,Takuya Morimoto,Shenghao Liu,Kenta Masuda,Yasushi Kageyama,Takashi Hirasawa,Fumio Matsuda,Naotake Ogasawara,Hiroshi Shimizu,Ken-Ichi Yoshida,Taku Oshima,Shu Ishikawa, DNA research : an international journal for rapid publication of reports on genes and genomes, Vol. 29, No. 3, 2022/05/27
  • Metabolomics-based phenotypic screens for evaluation of drug synergy via direct-infusion mass spectrometry., Xiyuan Lu,G Lavender Hackman,Achinto Saha,Atul Singh Rathore,Meghan Collins,Chelsea Friedman,S Stephen Yi,Fumio Matsuda,John DiGiovanni,Alessia Lodi,Stefano Tiziani, iScience, Vol. 25, No. 5, p. 104221-104221, 2022/05/20
  • Optogenetic reprogramming of carbon metabolism using light-powering microbial proton pump systems., Yoshihiro Toya,Yoko Hirono-Hara,Hidenobu Hirayama,Kentaro Kamata,Ryo Tanaka,Mikoto Sano,Sayaka Kitamura,Kensuke Otsuka,Rei Abe-Yoshizumi,Satoshi P Tsunoda,Hiroshi Kikukawa,Hideki Kandori,Hiroshi Shimizu,Fumio Matsuda,Jun Ishii,Kiyotaka Y Hara, Metabolic engineering, Vol. 72, p. 227-236, 2022/03/26
  • Improvement of 2,3-butanediol production by dCas9 gene expression system in Saccharomyces cerevisiae., Keisuke Morita,Taisuke Seike,Jun Ishii,Fumio Matsuda,Hiroshi Shimizu, Journal of bioscience and bioengineering, Vol. 133, No. 3, p. 208-212, 2022/03
  • Data science-based modeling of the lysine fermentation process, Seibutsu-kogaku Kaishi, The Society for Biotechnology, Japan, Vol. 100, No. 2, p. 80-80, 2022/02/25
  • Automated Recommendation of Research Keywords from PubMed That Suggest the Molecular Mechanism Associated with Biomarker Metabolites., Shinji Kanazawa,Satoshi Shimizu,Shigeki Kajihara,Norio Mukai,Junko Iida,Fumio Matsuda, Metabolites, Vol. 12, No. 2, 2022/02/01
  • Comparative Evaluation of Plasma Metabolomic Data from Multiple Laboratories., Shin Nishiumi,Yoshihiro Izumi,Akiyoshi Hirayama,Masatomo Takahashi,Motonao Nakao,Kosuke Hata,Daisuke Saigusa,Eiji Hishinuma,Naomi Matsukawa,Suzumi M Tokuoka,Yoshihiro Kita,Fumie Hamano,Nobuyuki Okahashi,Kazutaka Ikeda,Hiroki Nakanishi,Kosuke Saito,Masami Yokota Hirai,Masaru Yoshida,Yoshiya Oda,Fumio Matsuda,Takeshi Bamba, Metabolites, Vol. 12, No. 2, 2022/02/01
  • mfapy: An open-source Python package for 13C-based metabolic flux analysis., Fumio Matsuda,Kousuke Maeda,Takeo Taniguchi,Yuya Kondo,Futa Yatabe,Nobuyuki Okahashi,Hiroshi Shimizu, Metabolic engineering communications, Vol. 13, 2021/12
  • Defective cytokinin signaling reprograms lipid and flavonoid gene-to-metabolite networks to mitigate high salinity in Arabidopsis., Mostafa Abdelrahman,Rie Nishiyama,Cuong Duy Tran,Miyako Kusano,Ryo Nakabayashi,Yozo Okazaki,Fumio Matsuda,Ricardo A Chávez Montes,Mohammad Golam Mostofa,Weiqiang Li,Yasuko Watanabe,Atsushi Fukushima,Maho Tanaka,Motoaki Seki,Kazuki Saito,Luis Herrera-Estrella,Lam-Son Phan Tran, Proceedings of the National Academy of Sciences of the United States of America, Vol. 118, No. 48, 2021/11/30
  • Increased carvone production in Escherichia coli by balancing limonene conversion enzyme expression via targeted quantification concatamer proteome analysis., Erika Yoshida,Motoki Kojima,Munenori Suzuki,Fumio Matsuda,Kazutaka Shimbo,Akiko Onuki,Yousuke Nishio,Yoshihiro Usuda,Akihiko Kondo,Jun Ishii, Scientific reports, Vol. 11, No. 1, p. 22126-22126, 2021/11/11
  • Proteome analysis of response to different spectral light irradiation in Synechocystis sp. PCC 6803., Masakazu Toyoshima,Masumi Sakata,Yoshifumi Ueno,Yoshihiro Toya,Fumio Matsuda,Seiji Akimoto,Hiroshi Shimizu, Journal of proteomics, Vol. 246, p. 104306-104306, 2021/08/30
  • Synthetic production of prenylated naringenins in yeast using promiscuous microbial prenyltransferases., Shota Isogai,Nobuyuki Okahashi,Ririka Asama,Tomomi Nakamura,Tomohisa Hasunuma,Fumio Matsuda,Jun Ishii,Akihiko Kondo, Metabolic engineering communications, Vol. 12, 2021/06
  • Comparative 13 C-metabolic flux analysis indicate elevation of ATP regeneration, carbon dioxide, and heat production in industrial Saccharomyces cerevisiae strains., Futa Yatabe,Nobuyuki Okahashi,Taisuke Seike,Fumio Matsuda, Biotechnology journal, Vol. 17, No. 3, 2021/05/13
  • Soft-sensor development for monitoring the lysine fermentation process., Kento Tokuyama,Yoshiki Shimodaira,Yohei Kodama,Ryuzo Matsui,Yasuhiro Kusunose,Shunsuke Fukushima,Hiroaki Nakai,Yuichiro Tsuji,Yoshihiro Toya,Fumio Matsuda,Hiroshi Shimizu, Journal of bioscience and bioengineering, Vol. 132, No. 2, p. 183-189, 2021/05/03
  • Treatment of RB1-intact hepatocellular carcinoma with CDK4/6 inhibitor combination therapy., Jindan Sheng,Susumu Kohno,Nobuhiro Okada,Nobuyuki Okahashi,Kana Teranishi,Fumio Matsuda,Hiroshi Shimizu,Paing Linn,Naoko Nagatani,Minako Yamamura,Kenichi Harada,Shin-Ichi Horike,Hiroshi Inoue,Seiji Yano,Sharad Kumar,Shunsuke Kitajima,Itsuki Ajioka,Chiaki Takahashi, Hepatology (Baltimore, Md.), Vol. 74, No. 4, p. 1971-1993, 2021/04/30
  • Elevated Sporulation Efficiency in Fission Yeast Schizosaccharomyces japonicus Strains Isolated from Drosophila., Taisuke Seike,Natsue Sakata,Fumio Matsuda,Chikara Furusawa, Journal of fungi (Basel, Switzerland), Vol. 7, No. 5, 2021/04/29
  • Random Transfer of Ogataea polymorpha Genes into Saccharomyces cerevisiae Reveals a Complex Background of Heat Tolerance., Taisuke Seike,Yuki Narazaki,Yoshinobu Kaneko,Hiroshi Shimizu,Fumio Matsuda, Journal of fungi (Basel, Switzerland), Vol. 7, No. 4, 2021/04/15
  • Analyses of Lipid A Diversity in Gram-Negative Intestinal Bacteria Using Liquid Chromatography-Quadrupole Time-of-Flight Mass Spectrometry., Nobuyuki Okahashi,Masahiro Ueda,Fumio Matsuda,Makoto Arita, Metabolites, Vol. 11, No. 4, 2021/03/26
  • Seed-coat protective neolignans are produced by the dirigent protein AtDP1 and the laccase AtLAC5 in Arabidopsis., Keiko Yonekura-Sakakibara,Masaomi Yamamura,Fumio Matsuda,Eiichiro Ono,Ryo Nakabayashi,Satoko Sugawara,Tetsuya Mori,Yuki Tobimatsu,Toshiaki Umezawa,Kazuki Saito, The Plant cell, Vol. 33, No. 1, p. 129-152, 2021/03/22
  • Mutations in hik26 and slr1916 lead to high-light stress tolerance in Synechocystis sp. PCC6803., Katsunori Yoshikawa,Kenichi Ogawa,Yoshihiro Toya,Seiji Akimoto,Fumio Matsuda,Hiroshi Shimizu, Communications biology, Vol. 4, No. 1, p. 343-343, 2021/03/16
  • Fake metabolomics chromatogram generation for facilitating deep learning of peak-picking neural networks., Shinji Kanazawa,Akira Noda,Arisa Ito,Kyoko Hashimoto,Akihiro Kunisawa,Tsuyoshi Nakanishi,Shigeki Kajihara,Norio Mukai,Junko Iida,Eiichiro Fukusaki,Fumio Matsuda, Journal of bioscience and bioengineering, Vol. 131, No. 2, p. 207-212, 2021/02
  • Novel allosteric inhibition of phosphoribulokinase identified by ensemble kinetic modeling of Synechocystis sp. PCC 6803 metabolism., Hiroki Nishiguchi,James Liao,Hiroshi Shimizu,Fumio Matsuda, Metabolic engineering communications, Vol. 11, 2020/12
  • Data science-based modeling of the lysine fermentation process., Kento Tokuyama,Yoshiki Shimodaira,Takahiro Terawaki,Yasuhiro Kusunose,Hiroaki Nakai,Yuichiro Tsuji,Yoshihiro Toya,Fumio Matsuda,Hiroshi Shimizu, Journal of bioscience and bioengineering, Vol. 130, No. 4, p. 409-415, 2020/10
  • Assessment of Protein Content and Phosphorylation Level in Synechocystis sp. PCC 6803 under Various Growth Conditions Using Quantitative Phosphoproteomic Analysis., Masakazu Toyoshima,Yuma Tokumaru,Fumio Matsuda,Hiroshi Shimizu, Molecules (Basel, Switzerland), Vol. 25, No. 16, 2020/08/06
  • Direct and quantitative analysis of altered metabolic flux distributions and cellular ATP production pathway in fumarate hydratase-diminished cells., Shingo Noguchi,Hirokazu Ishikawa,Kenichi Wakita,Fumio Matsuda,Hiroshi Shimizu, Scientific reports, Vol. 10, No. 1, p. 13065-13065, 2020/08/03
  • Effects of mutations of GID protein-coding genes on malate production and enzyme expression profiles in Saccharomyces cerevisiae., Hiroaki Negoro,Kengo Matsumura,Fumio Matsuda,Hiroshi Shimizu,Yoji Hata,Hiroki Ishida, Applied microbiology and biotechnology, Vol. 104, No. 11, p. 4971-4983, 2020/06
  • Drought Stress Responses in Context-Specific Genome-Scale Metabolic Models of Arabidopsis thaliana, Ratklao Siriwach,Fumio Matsuda,Kentaro Yano,Masami Yokota Hirai, Metabolites, MDPI AG, Vol. 10, No. 4, p. 159-159, 2020/04/18
  • Computational data mining method for isotopomer analysis in the quantitative assessment of metabolic reprogramming, Fumio Matsuda,Kousuke Maeda,Nobuyuki Okahashi, Scientific Reports, Springer Science and Business Media LLC, Vol. 10, No. 1, 2020/01
  • Comparison of metabolic profiles of yeasts based on the difference of the Crabtree positive and negative., Makoto Imura,Katsuaki Nitta,Ryo Iwakiri,Fumio Matsuda,Hiroshi Shimizu,Eiichiro Fukusaki, Journal of bioscience and bioengineering, Vol. 129, No. 1, p. 52-58, 2020/01
  • Corrigendum: A Fusion Method to Develop an Expanded Artificial Genomic RNA Replicable by Qβ Replicase., Kensuke Ueda,Ryo Mizuuchi,Fumio Matsuda,Norikazu Ichihashi, Chembiochem : a European journal of chemical biology, Vol. 20, No. 23, p. 2968-2968, 2019/12/02
  • Survival of membrane-damaged Escherichia coli in a cytosol-mimicking solution, Rikuto Kamiura,Fumio Matsuda,Norikazu Ichihashi, Journal of Bioscience and Bioengineering, Elsevier BV, Vol. 128, No. 5, p. 558-563, 2019/11
  • Inter-Laboratory Comparison of Metabolite Measurements for Metabolomics Data Integration, Yoshihiro Izumi,Fumio Matsuda,Akiyoshi Hirayama,Kazutaka Ikeda,Yoshihiro Kita,Kanta Horie,Daisuke Saigusa,Kosuke Saito,Yuji Sawada,Hiroki Nakanishi,Nobuyuki Okahashi,Masatomo Takahashi,Motonao Nakao,Kosuke Hata,Yutaro Hoshi,Motohiko Morihara,Kazuhiro Tanabe,Takeshi Bamba,Yoshiya Oda, Metabolites, MDPI AG, Vol. 9, No. 11, p. 257-257, 2019/10/31
  • Repression of mitochondrial metabolism for cytosolic pyruvate-derived chemical production in Saccharomyces cerevisiae., Keisuke Morita,Fumio Matsuda,Koji Okamoto,Jun Ishii,Akihiko Kondo,Hiroshi Shimizu, Microbial cell factories, Vol. 18, No. 1, p. 177-177, 2019/10/15
  • Time-resolved analysis of short term metabolic adaptation at dark transition in Synechocystis sp. PCC 6803, Masaharu Maruyama,Hiroki Nishiguchi,Masakazu Toyoshima,Nobuyuki Okahashi,Fumio Matsuda,Hiroshi Shimizu, Journal of Bioscience and Bioengineering, Vol. 128, No. 4, p. 424-428, 2019/10
  • A Fusion Method to Develop an Expanded Artificial Genomic RNA Replicable by Qβ Replicase, Kensuke Ueda,Ryo Mizuuchi,Fumio Matsuda,Norikazu Ichihashi, ChemBioChem, Wiley, Vol. 20, No. 18, p. 2331-2335, 2019/09/16
  • クラブトリー陽性および陰性の差異に基づく酵母代謝のプロファイルの比較, 井村 誠,新田 克章,岩切 亮,松田 史生,清水 浩,福崎 英一郎, 日本生物工学会大会講演要旨集, (公社)日本生物工学会, Vol. 2019年, p. 179-179, 2019/08
  • Theophylline-inducible riboswitch accurately regulates protein expression at low level in Escherichia coli., Rikuto Kamiura,Yoshihiro Toya,Fumio Matsuda,Hiroshi Shimizu, Biotechnology letters, Vol. 41, No. 6-7, p. 743-751, 2019/07
  • 代謝工学におけるバイオインフォマティクスの利用, 戸谷吉博,松田史生, 生物工学誌, Vol. 97, No. 5, p. 261-264, 2019/05
  • Transomics data-driven, ensemble kinetic modeling for system-level understanding and engineering of the cyanobacteria central metabolism, Hiroki Nishiguchi,Natsuki Hiasa,Kiyoka Uebayashi,James Liao,Hiroshi Shimizu,Fumio Matsuda, Metabolic Engineering, Elsevier BV, Vol. 52, p. 273-283, 2019/03
  • Magnesium starvation improves production of malonyl-CoA-derived metabolites in Escherichia coli., Kento Tokuyama,Yoshihiro Toya,Fumio Matsuda,Brady F Cress,Mattheos A G Koffas,Hiroshi Shimizu, Metabolic engineering, Vol. 52, p. 215-223, 2019/03
  • Fragmentation of Dicarboxylic and Tricarboxylic Acids in the Krebs Cycle Using GC-EI-MS and GC-EI-MS/MS., Nobuyuki Okahashi,Shuichi Kawana,Junko Iida,Hiroshi Shimizu,Fumio Matsuda, Mass spectrometry (Tokyo, Japan), Vol. 8, No. 1, 2019
  • Sugar phosphate analysis with baseline separation and soft ionization by gas chromatography-negative chemical ionization-mass spectrometry improves flux estimation of bidirectional reactions in cancer cells, Nobuyuki Okahashi,Kousuke Maeda,Shuichi Kawana,Junko Iida,Hiroshi Shimizu,Fumio Matsuda, Metabolic Engineering, Vol. 51, p. 43-49, 2019/01
  • Editorial overview: Recent progress in analytical technologies for design-build-test-learn cycle in biotechnology., Hiroshi Shimizu,Fumio Matsuda, Current opinion in biotechnology, Vol. 54, p. 145-147, 2018/12
  • Targeted proteome analysis of microalgae under high-light conditions by optimized protein extraction of photosynthetic organisms, Masakazu Toyoshima,Masumi Sakata,Kazuki Ohnishi,Yuma Tokumaru,Yusuke Kato,Ryutaro Tokutsu,Wataru Sakamoto,Jun Minagawa,Fumio Matsuda,Hiroshi Shimizu, Journal of Bioscience and Bioengineering, Elsevier {BV}, Vol. 127, No. 3, p. 394-402, 2018/09
  • Metabolic flux of the oxidative pentose phosphate pathway under low light conditions in Synechocystis sp. PCC 6803, Kentaro Ueda,Tsubasa Nakajima,Katsunori Yoshikawa,Yoshihiro Toya,Fumio Matsuda,Hiroshi Shimizu, Journal of Bioscience and Bioengineering, Elsevier B.V., Vol. 126, No. 1, p. 38-43, 2018/07/01
  • Molecular Components of Arabidopsis Intact Vacuoles Clarified with Metabolomic and Proteomic Analyses., Miwa Ohnishi,Aya Anegawa,Yuko Sugiyama,Kazuo Harada,Akira Oikawa,Yasumune Nakayama,Fumio Matsuda,Yukiko Nakamura,Ryosuke Sasaki,Chizuko Shichijo,Patrick G Hatcher,Hidehiro Fukaki,Shigehiko Kanaya,Koh Aoki,Mami Yamazaki,Eiichiro Fukusaki,Kazuki Saito,Tetsuro Mimura, Plant & cell physiology, Vol. 59, No. 7, p. 1353-1362, 2018/07/01
  • Comparative analysis of fermentation and enzyme expression profiles among industrial Saccharomyces cerevisiae strains, Kiyoka Uebayashi,Hiroshi Shimizu,Fumio Matsuda, Applied Microbiology and Biotechnology, Springer Verlag, p. 1-11, 2018/06/07
  • Transcriptome analysis of the cyanobacterium Synechocystis sp. PCC 6803 and mechanisms of photoinhibition tolerance under extreme high light conditions., Ogawa K,Yoshikawa K,Matsuda F,Toya Y,Shimizu H, Journal of bioscience and bioengineering, Vol. 126, No. 5, p. 596-602, 2018/06
  • Application of adaptive laboratory evolution to overcome a flux limitation in an Escherichia coli production strain, Kento Tokuyama,Yoshihiro Toya,Takaaki Horinouchi,Chikara Furusawa,Fumio Matsuda,Hiroshi Shimizu, Biotechnology and Bioengineering, John Wiley and Sons Inc., Vol. 115, No. 6, p. 1542-1551, 2018/06/01
  • A pyruvate carbon flux tugging strategy for increasing 2,3-butanediol production and reducing ethanol subgeneration in the yeast Saccharomyces cerevisiae, Jun Ishii,Keisuke Morita,Kengo Ida,Hiroko Kato,Shohei Kinoshita,Shoko Hataya,Hiroshi Shimizu,Akihiko Kondo,Fumio Matsuda, Biotechnology for Biofuels, BioMed Central, No. 11, 2018/06
  • <sup>13</sup>C-metabolic flux analysis of ethanol-assimilating Saccharomyces cerevisiae for S-adenosyl-L-methionine production., Hayakawa K,Matsuda F,Shimizu H, Microbial cell factories, BioMed Central Ltd., Vol. 17, No. 1, 2018/05
  • Metabolic engineering of mevalonate-producing Escherichia coli strains based on thermodynamic analysis, Hikaru Nagai,Ami Masuda,Yoshihiro Toya,Fumio Matsuda,Hiroshi Shimizu, Metabolic Engineering, Academic Press Inc., Vol. 47, p. 1-9, 2018/05/01
  • Expression of Saccharomyces cerevisiae cDNAs to enhance the growth of non-ethanol-producing S. cerevisiae strains lacking pyruvate decarboxylases, Yuki Narazaki,Yuta Nomura,Keisuke Morita,Hiroshi Shimizu,Fumio Matsuda, Journal of Bioscience and Bioengineering, Elsevier B.V., 2018
  • Mass Spectrometry-Based Method to Study Inhibitor-Induced Metabolic Redirection in the Central Metabolism of Cancer Cells., Chie Araki,Nobuyuki Okahashi,Kousuke Maeda,Hiroshi Shimizu,Fumio Matsuda, Mass spectrometry (Tokyo, Japan), Vol. 7, No. 1, 2018
  • Comparative Targeted Proteomics of the Central Metabolism and Photosystems in SigE mutant strains of synechocystis sp. PCC 6803, Yuma Tokumaru,Kiyoka Uebayashi,Masakazu Toyoshima,Takashi Osanai,Fumio Matsuda,Hiroshi Shimizu, Molecules, MDPI AG, Vol. 23, No. 5, 2018
  • A Highly Specific Genome-Wide Association Study Integrated with Transcriptome Data Reveals the Contribution of Copy Number Variations to Specialized Metabolites in Arabidopsis thaliana Accessions, Kazumasa Shirai,Fumio Matsuda,Ryo Nakabayashi,Masanori Okamoto,Maho Tanaka,Akihiro Fujimoto,Minami Shimizu,Kazuo Shinozaki,Motoaki Seki,Kazuki Saito,Kousuke Hanada, Molecular Biology and Evolution, Oxford University Press (OUP), Vol. 34, No. 12, p. 3111-3122, 2017/12/01
  • Learning from quantitative data to understand central carbon metabolism, Fumio Matsuda,Yoshihiro Toya,Hiroshi Shimizu, Biotechnology Advances, Elsevier Inc., Vol. 35, No. 8, p. 971-980, 2017/12/01
  • Metabolic engineering of isopropyl alcohol-producing Escherichia coli strains with C-13-metabolic flux analysis, Nobuyuki Okahashi,Fumio Matsuda,Katsunori Yoshikawa,Tomokazu Shirai,Yoshiko Matsumoto,Mitsufumi Wada,Hiroshi Shimizu, BIOTECHNOLOGY AND BIOENGINEERING, WILEY, Vol. 114, No. 12, p. 2782-2793, 2017/12
  • Metabolic engineering of Synechococcus elongatus PCC 7942 for improvement of 1,3-propanediol and glycerol production based on in silico simulation of metabolic flux distribution, Yasutaka Hirokawa,Shingo Matsuo,Hiroyuki Hamada,Fumio Matsuda,Taizo Hanai, Microbial Cell Factories, BioMed Central Ltd., Vol. 16, No. 1, 2017/11/25
  • The RB-IL-6 axis controls self-renewal and endocrine therapy resistance by fine-tuning mitochondrial activity., S Kitajima,A Yoshida,S Kohno,F Li,S Suzuki,N Nagatani,Y Nishimoto,N Sasaki,H Muranaka,Y Wan,T C Thai,N Okahashi,F Matsuda,H Shimizu,T Nishiuchi,Y Suzuki,K Tominaga,N Gotoh,M Suzuki,M E Ewen,D A Barbie,O Hirose,T Tanaka,C Takahashi, Oncogene, Vol. 36, No. 36, p. 5145-5157, 2017/09/07
  • Heterologous expression of bacterial phosphoenol pyruvate carboxylase and Entner-Doudoroff pathway in Saccharomyces cerevisiae for improvement of isobutanol production, Keisuke Morita,Yuta Nomura,Jun Ishii,Fumio Matsuda,Akihiko Kondo,Hiroshi Shimizu, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, SOC BIOSCIENCE BIOENGINEERING JAPAN, Vol. 124, No. 3, p. 263-270, 2017/09
  • Erratum: Acetate-mediated novel survival strategy against drought in plants (Nature Plants (2017) 3 (17097) DOI: 10.1038/nplants.2017.97), Jong-Myong Kim,Taiko Kim To,Akihiro Matsui,Keitaro Tanoi,Natsuko I. Kobayashi,Fumio Matsuda,Yoshiki Habu,Daisuke Ogawa,Takuya Sakamoto,Sachihiro Matsunaga,Khurram Bashir,Sultana Rasheed,Marina Ando,Hiroko Takeda,Kanako Kawaura,Miyako Kusano,Atsushi Fukushima,Takaho A. Endo,Takashi Kuromori,Junko Ishida,Taeko Morosawa,Maho Tanaka,Chieko Torii,Yumiko Takebayashi,Hitoshi Sakakibara,Yasunari Ogihara,Kazuki Saito,Kazuo Shinozaki,Alessandra Devoto,Motoaki Seki, Nature Plants, Palgrave Macmillan Ltd., Vol. 3, 2017/07/17
  • Acetate-mediated novel survival strategy against drought in plants, Jong-Myong Kim,Taiko Kim To,Akihiro Matsui,Keitaro Tanoi,Natsuko I. Kobayashi,Fumio Matsuda,Yoshiki Habu,Daisuke Ogawa,Takuya Sakamoto,Sachihiro Matsunaga,Khurram Bashir,Sultana Rasheed,Marina Ando,Hiroko Takeda,Kanako Kawaura,Miyako Kusano,Atsushi Fukushima,Takaho A. Endo,Takashi Kuromori,Junko Ishida,Taeko Morosawa,Maho Tanaka,Chieko Torii,Yumiko Takebayashi,Hitoshi Sakakibara,Yasunari Ogihara,Kazuki Saito,Kazuo Shinozaki,Alessandra Devoto,Motoaki Seki, Nature Plants, Springer Science and Business Media LLC, Vol. 3, No. 7, 2017/06/26
  • Synthetic metabolic bypass for a metabolic toggle switch enhances acetyl-CoA supply for isopropanol production by Escherichia coli, Yuki Soma,Taiki Yamaji,Fumio Matsuda,Taizo Hanai, Journal of Bioscience and Bioengineering, Elsevier B.V., Vol. 123, No. 5, p. 625-633, 2017/05/01
  • Metabolic Flux Analysis of the Synechocystis sp. PCC 6803 Delta nrtABCD Mutant Reveals a Mechanism for Metabolic Adaptation to Nitrogen-Limited Conditions (vol 58, pg 537, 2017), Tsubasa Nakajima,Katsunori Yoshikawa,Yoshihiro Toya,Fumio Matsuda,Hiroshi Shimizu, PLANT AND CELL PHYSIOLOGY, OXFORD UNIV PRESS, Vol. 58, No. 5, p. 976-976, 2017/05
  • Metabolic Flux Analysis of the Synechocystis sp PCC 6803 Delta nrtABCD Mutant Reveals a Mechanism for Metabolic Adaptation to Nitrogen-Limited Conditions, Tsubasa Nakajima,Katsunori Yoshikawa,Yoshihiro Toya,Fumio Matsuda,Hiroshi Shimizu, PLANT AND CELL PHYSIOLOGY, OXFORD UNIV PRESS, Vol. 58, No. 3, p. 537-545, 2017/03
  • Prediction of Hopeless Peptides Unlikely to be Selected for Targeted Proteome Analysis., Matsuda F,Tomita A,Shimizu H, Mass spectrometry (Tokyo, Japan), Vol. 6, No. 1, 2017/02
  • Targeted proteome analysis of single-gene deletion strains of Saccharomyces cerevisiae lacking enzymes in the central carbon metabolism, Fumio Matsuda,Syohei Kinoshita,Shunsuke Nishino,Atsumi Tomita,Hiroshi Shimizu, PLOS ONE, PUBLIC LIBRARY SCIENCE, Vol. 12, No. 2, 2017/02
  • C-13-metabolic flux analysis for mevalonate-producing strain of Escherichia coli, Keisuke Wada,Yoshihiro Toya,Satomi Banno,Katsunori Yoshikawa,Fumio Matsuda,Hiroshi Shimizu, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, SOC BIOSCIENCE BIOENGINEERING JAPAN, Vol. 123, No. 2, p. 177-182, 2017/02
  • Rewiring of embryonic glucose metabolism via suppression of PFK-1 and aldolase during mouse chorioallantoic branching., Hidenobu Miyazawa,Yoshifumi Yamaguchi,Yuki Sugiura,Kurara Honda,Koki Kondo,Fumio Matsuda,Takehiro Yamamoto,Makoto Suematsu,Masayuki Miura, Development (Cambridge, England), Vol. 144, No. 1, p. 63-73, 2017/01/01
  • Lipoprotein profiling methodology based on determination of apolipoprotein concentration., Hiroaki Takeda,Yoshihiro Izumi,Atsumi Tomita,Tomonari Koike,Masashi Shiomi,Eiichiro Fukusaki,Fumio Matsuda,Takeshi Bamba, Bioanalysis, Vol. 9, No. 1, p. 9-19, 2017/01
  • Differences in glucose yield of residues from among varieties of rice, wheat, and sorghum after dilute acid pretreatment, Hiroshi Teramura,Kengo Sasaki,Hideo Kawaguchi,Fumio Matsuda,Jun Kikuchi,Tomokazu Shirai,Takashi Sazuka,Masanori Yamasaki,Shigeo Takumi,Chiaki Ogino,Akihiko Kondo, Bioscience, Biotechnology and Biochemistry, Vol. 81, No. 8, p. 1650-1656, 2017
  • Metabolic Adaptation to Nutritional Stress in Human Colorectal Cancer., Masaaki Miyo,Masamitsu Konno,Naohiro Nishida,Toshinori Sueda,Kozo Noguchi,Hidetoshi Matsui,Hugh Colvin,Koichi Kawamoto,Jun Koseki,Naotsugu Haraguchi,Junichi Nishimura,Taishi Hata,Noriko Gotoh,Fumio Matsuda,Taroh Satoh,Tsunekazu Mizushima,Hiroshi Shimizu,Yuichiro Doki,Masaki Mori,Hideshi Ishii, Scientific reports, Vol. 6, p. 38415-38415, 2016/12/07
  • Investigation of useful carbon tracers for <sup>13</sup>C-metabolic flux analysis of Escherichia coli by considering five experimentally determined flux distributions, Kousuke Maeda,Nobuyuki Okahashi,Yoshihiro Toya,Fumio Matsuda,Hiroshi Shimizu, Metabolic Engineering Communications, Vol. 3, p. 187-195, 2016/12/01
  • Positive effects of proline addition on the central metabolism of wild-type and lactic acid-producing Saccharomyces cerevisiae strains, Riyanto Heru Nugroho,Katsunori Yoshikawa,Fumio Matsuda,Hiroshi Shimizu, BIOPROCESS AND BIOSYSTEMS ENGINEERING, SPRINGER, Vol. 39, No. 11, p. 1711-1716, 2016/11
  • GC-MS/MS survey of collision-induced dissociation of tert-butyldimethylsilyl-derivatized amino acids and its application to C-13-metabolic flux analysis of Escherichia coli central metabolism, Nobuyuki Okahashi,Shuichi Kawana,Junko Iida,Hiroshi Shimizu,Fumio Matsuda, ANALYTICAL AND BIOANALYTICAL CHEMISTRY, SPRINGER HEIDELBERG, Vol. 408, No. 22, p. 6133-6140, 2016/09
  • Toward the complete utilization of rice straw: Methane fermentation and lignin recovery by a combinational process involving mechanical milling, supporting material and nanofiltration, Kengo Sasaki,Mami Okamoto,Tomokazu Shirai,Yota Tsuge,Ayami Fujino,Daisuke Sasaki,Masahiko Morita,Fumio Matsuda,Jun Kikuchi,Akihiko Kondo, BIORESOURCE TECHNOLOGY, ELSEVIER SCI LTD, Vol. 216, p. 830-837, 2016/09
  • Regular expressions of MS/MS spectra for partial annotation of metabolite features, Fumio Matsuda, Metabolomics, Springer New York LLC, Vol. 12, No. 7, 2016/07/01
  • Overexpressing enzymes of the Ehrlich pathway and deleting genes of the competing pathway in Saccharomyces cerevisiae for increasing 2-phenylethanol production from glucose, Li Shen,Yuya Nishimura,Fumio Matsuda,Jun Ishii,Akihiko Kondo, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, SOC BIOSCIENCE BIOENGINEERING JAPAN, Vol. 122, No. 1, p. 34-39, 2016/07
  • Metabolome analysis of Saccharomyces cerevisiae and optimization of culture medium for S-adenosyl-L-methionine production, Kenshi Hayakawa,Fumio Matsuda,Hiroshi Shimizu, AMB EXPRESS, BIOMED CENTRAL LTD, Vol. 6, No. 1, 2016/06
  • Organosolv pretreatment of sorghum bagasse using a low concentration of hydrophobic solvents such as 1-butanol or 1-pentanol, Hiroshi Teramura,Kengo Sasaki,Tomoko Oshima,Fumio Matsuda,Mami Okamoto,Tomokazu Shirai,Hideo Kawaguchi,Chiaki Ogino,Ko Hirano,Takashi Sazuka,Hidemi Kitano,Jun Kikuchi,Akihiko Kondo, BIOTECHNOLOGY FOR BIOFUELS, BIOMED CENTRAL LTD, Vol. 9, 2016/02
  • Metabolic characterization of cultured mammalian cells by mass balance analysis, tracer labeling experiments and computer-aided simulations, Nobuyuki Okahashi,Susumu Kohno,Shunsuke Kitajima,Fumio Matsuda,Chiaki Takahashi,Hiroshi Shimizu, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, SOC BIOSCIENCE BIOENGINEERING JAPAN, Vol. 120, No. 6, p. 725-731, 2015/12
  • C-13-metabolic flux analysis in S-adenosyl-L-methionine production by Saccharomyces cerevisiae, Kenshi Hayakawa,Shuichi Kajihata,Fumio Matsuda,Hiroshi Shimizu, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, SOC BIOSCIENCE BIOENGINEERING JAPAN, Vol. 120, No. 5, p. 532-538, 2015/11
  • Absolute quantitation of glycolytic intermediates reveals thermodynamic shifts in Saccharomyces cerevisiae strains lacking PFK1 or ZWF1 genes, Shunsuke Nishino,Nobuyuki Okahashi,Fumio Matsuda,Hiroshi Shimizu, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, SOC BIOSCIENCE BIOENGINEERING JAPAN, Vol. 120, No. 3, p. 280-286, 2015/09
  • C-13-based metabolic flux analysis of Saccharomyces cerevisiae with a reduced Crabtree effect, Shuichi Kajihata,Fumio Matsuda,Mika Yoshimi,Kenshi Hayakawa,Chikara Furusawa,Akihisa Kanda,Hiroshi Shimizu, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, SOC BIOSCIENCE BIOENGINEERING JAPAN, Vol. 120, No. 2, p. 140-144, 2015/08
  • Precipitate obtained following membrane separation of hydrothermally pretreated rice straw liquid revealed by 2D NMR to have high lignin content, Kengo Sasaki,Mami Okamoto,Tomokazu Shirai,Yota Tsuge,Hiroshi Teramura,Daisuke Sasaki,Hideo Kawaguchi,Tomohisa Hasunuma,Chiaki Ogino,Fumio Matsuda,Jun Kikuchi,Akihiko Kondo, BIOTECHNOLOGY FOR BIOFUELS, BIOMED CENTRAL LTD, Vol. 8, 2015/06
  • Changes in Lignin and Polysaccharide Components in 13 Cultivars of Rice Straw following Dilute Acid Pretreatment as Studied by Solution-State 2D H-1-C-13 NMR, Hiroshi Teramura,Kengo Sasaki,Tomoko Oshima,Shimpei Aikawa,Fumio Matsuda,Mami Okamoto,Tomokazu Shirai,Hideo Kawaguchi,Chiaki Ogino,Masanori Yamasaki,Jun Kikuchi,Akihiko Kondo, PLOS ONE, PUBLIC LIBRARY SCIENCE, Vol. 10, No. 6, 2015/06
  • Evaluation of Brachypodium distachyon L-Tyrosine Decarboxylase Using L-Tyrosine Over-Producing Saccharomyces cerevisiae, Shuhei Noda,Tomokazu Shirai,Keiichi Mochida,Fumio Matsuda,Sachiko Oyama,Mami Okamoto,Akihiko Kondo, PLOS ONE, PUBLIC LIBRARY SCIENCE, Vol. 10, No. 5, 2015/05
  • Eliminating the isoleucine biosynthetic pathway to reduce competitive carbon outflow during isobutanol production by Saccharomyces cerevisiae, Kengo Ida,Jun Ishii,Fumio Matsuda,Takashi Kondo,Akihiko Kondo, MICROBIAL CELL FACTORIES, BIOMED CENTRAL LTD, Vol. 14, 2015/04
  • Nano-scale liquid chromatography coupled to tandem mass spectrometry using the multiple reaction monitoring mode based quantitative platform for analyzing multiple enzymes associated with central metabolic pathways of Saccharomyces cerevisiae using ultra fast mass spectrometry, Fumio Matsuda,Tairo Ogura,Atsumi Tomita,Ichiro Hirano,Hiroshi Shimizu, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, SOC BIOSCIENCE BIOENGINEERING JAPAN, Vol. 119, No. 1, p. 117-120, 2015/01
  • Metabolome-genome-wide association study dissects genetic architecture for generating natural variation in rice secondary metabolism, Matsuda Fumio,Nakabayashi Ryo,Yang Zhigang,Okazaki Yozo,Yonemaru Jun-ichi,Ebana Kaworu,Yano Masahiro,Saito Kazuki, Plant Journal, Vol. 81, No. 1, p. 13-23, 2015
  • Tyramine biosynthesis from glucose using Brachypodium distachyon tyrosine decarboxylase expressing Saccharomyces cerevisiae, Shuhei Noda,Tomokazu Shirai,Keiichi Mochida,Sachiko Oyama,Mami Okamoto,Fumio Matsuda,Kondo Akihiko, JOURNAL OF BIOTECHNOLOGY, ELSEVIER SCIENCE BV, Vol. 185, p. S102-S102, 2014/09
  • Integrated Metabolic Flux and Omics Analysis of Synechocystis sp PCC 6803 under Mixotrophic and Photoheterotrophic Conditions, Tsubasa Nakajima,Shuichi Kajihata,Katsunori Yoshikawa,Fumio Matsuda,Chikara Furusawa,Takashi Hirasawa,Hiroshi Shimizu, PLANT AND CELL PHYSIOLOGY, OXFORD UNIV PRESS, Vol. 55, No. 9, p. 1605-1612, 2014/09
  • Three gene expression vector sets for concurrently expressing multiple genes in Saccharomyces cerevisiae, Jun Ishii,Takashi Kondo,Harumi Makino,Akira Ogura,Fumio Matsuda,Akihiko Kondo, FEMS YEAST RESEARCH, WILEY-BLACKWELL, Vol. 14, No. 3, p. 399-411, 2014/05
  • Increased biomass production and glycogen accumulation in apcE gene deleted Synechocystis sp PCC 6803, Ancy Joseph,Shimpei Aikawa,Kengo Sasaki,Fumio Matsuda,Tomohisa Hasunuma,Akihiko Kondo, AMB EXPRESS, BIOMED CENTRAL LTD, Vol. 4, 2014/03
  • Enhancement of oxidative and drought tolerance in Arabidopsis by overaccumulation of antioxidant flavonoids., Ryo Nakabayashi,Keiko Yonekura-Sakakibara,Kaoru Urano,Makoto Suzuki,Yutaka Yamada,Tomoko Nishizawa,Fumio Matsuda,Mikiko Kojima,Hitoshi Sakakibara,Kazuo Shinozaki,Anthony J Michael,Takayuki Tohge,Mami Yamazaki,Kazuki Saito, The Plant journal : for cell and molecular biology, Vol. 77, No. 3, p. 367-79, 2014/02
  • Rre37 stimulates accumulation of 2-oxoglutarate and glycogen under nitrogen starvation in Synechocystis sp PCC 6803, Joseph Ancy,Aikawa Shimpei,Sasaki Kengo,Teramura Hiroshi,Hasunuma Tomohisa,Matsuda Fumio,Osanai Takashi,Hirai Masami Yokota,Kondo Akihiko, FEBS LETTERS, Vol. 588, No. 3, p. 466-471, 2014/01/31
  • OpenMebius: An Open Source Software for Isotopically Nonstationary C-13-Based Metabolic Flux Analysis, Shuichi Kajihata,Chikara Furusawa,Fumio Matsuda,Hiroshi Shimizu, BIOMED RESEARCH INTERNATIONAL, HINDAWI PUBLISHING CORPORATION, 2014
  • Rre37 stimulates accumulation of 2-oxoglutarate and glycogen under nitrogen starvation in Synechocystis sp PCC 6803, Ancy Joseph,Shimpei Aikawa,Kengo Sasaki,Hiroshi Teramura,Tomohisa Hasunuma,Fumio Matsuda,Takashi Osanai,Masami Yokota Hirai,Akihiko Kondo, FEBS LETTERS, ELSEVIER SCIENCE BV, Vol. 588, No. 3, p. 466-471, 2014/01
  • Production of indole alkaloids by metabolic engineering of the tryptophan pathway in rice, Joseph G. Dubouzet,Fumio Matsuda,Atsushi Ishihara,Hisashi Miyagawa,Kyo Wakasa, Plant Biotechnology Journal, Vol. 11, No. 9, p. 1103-1111, 2013/12
  • Glucose content in the liquid hydrolysate after dilute acid pretreatment is affected by the starch content in rice straw, Hiroshi Teramura,Tomoko Oshima,Fumio Matsuda,Kengo Sasaki,Chiaki Ogino,Masanori Yamasaki,Akihiko Kondo, BIORESOURCE TECHNOLOGY, ELSEVIER SCI LTD, Vol. 149, p. 520-524, 2013/12
  • Increased isobutanol production in Saccharomyces cerevisiae by eliminating competing pathways and resolving cofactor imbalance, Fumio Matsuda,Jun Ishii,Takashi Kondo,Kengo Ida,Hironori Tezuka,Akihiko Kondo, MICROBIAL CELL FACTORIES, BIOMED CENTRAL LTD, Vol. 12, 2013/12
  • Metabolic pathway engineering of yeast Saccharomyces cerevisiae for isobutanol production, Jun Ishii,Fumio Matsuda,Akihiko Kondo, YEAST, WILEY-BLACKWELL, Vol. 30, p. 210-210, 2013/09
  • Method for Assessing the Statistical Significance of Mass Spectral Similarities Using Basic Local Alignment Search Tool Statistics, Fumio Matsuda,Hiroshi Tsugawa,Eiichiro Fukusaki, ANALYTICAL CHEMISTRY, AMER CHEMICAL SOC, Vol. 85, No. 17, p. 8291-8297, 2013/09
  • Evaluation of control mechanisms for Saccharomyces cerevisiae central metabolic pathway using metabolic analysis of single-gene deletion mutants, Shuhei Noda,Tomokazu Shirai,Fumio Matsuda,Mami Okamoto,Akihiko Kondo, YEAST, WILEY-BLACKWELL, Vol. 30, p. 170-170, 2013/09
  • Cocktail delta-integration of xylose assimilation genes for efficient ethanol production from xylose in Saccharomyces cerevisiae, Hiroko Kato,Fumio Matsuda,Ryosuke Yamada,Kento Nagata,Tomokazu Shirai,Tomohisa Hasunuma,Akihiko Kondo, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, SOC BIOSCIENCE BIOENGINEERING JAPAN, Vol. 116, No. 3, p. 333-336, 2013/09
  • Aqueous size-exclusion chromatographic method for the quantification of cyanobacterial native glycogen, Yoshihiro Izumi,Shimpei Aikawa,Fumio Matsuda,Tomohisa Hasunuma,Akihiko Kondo, Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences, Vol. 930, p. 90-97, 2013/07/01
  • Regulation of central carbon metabolism in Saccharomyces cerevisiae by metabolic inhibitors, Fumio Matsuda,Tomokazu Shirai,Jun Ishii,Akihiko Kondo, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, SOC BIOSCIENCE BIOENGINEERING JAPAN, Vol. 116, No. 1, p. 59-64, 2013/07
  • Direct conversion of Spirulina to ethanol without pretreatment or enzymatic hydrolysis processes, Shimpei Aikawa,Ancy Joseph,Ryosuke Yamada,Yoshihiro Izumi,Takahiro Yamagishi,Fumio Matsuda,Hiroshi Kawai,Jo-Shu Chang,Tomohisa Hasunuma,Akihiko Kondo, ENERGY & ENVIRONMENTAL SCIENCE, ROYAL SOC CHEMISTRY, Vol. 6, No. 6, p. 1844-1849, 2013/06
  • Display of active beta-glucosidase on the surface of Schizosaccharomyces pombe cells using novel anchor proteins, Tsutomu Tanaka,Sayoko Matsumoto,Mari Yamada,Ryosuke Yamada,Fumio Matsuda,Akihiko Kondo, Applied Microbiology and Biotechnology, Vol. 97, No. 10, p. 4343-4352, 2013/05
  • Utilization of Lactic Acid Bacterial Genes in Synechocystis sp PCC 6803 in the Production of Lactic Acid, Ancy Joseph,Shimpei Aikawa,Kengo Sasaki,Yota Tsuge,Fumio Matsuda,Tsutomu Tanaka,Akihiko Kondo, BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, TAYLOR & FRANCIS LTD, Vol. 77, No. 5, p. 966-970, 2013/05
  • Integrative Analysis of Secondary Metabolism and Transcript Regulation in Arabidopsis Thaliana, Fumio Matsuda,Kazuki Saito, The Handbook of Plant Metabolomics, Wiley-VCH, p. 175-195, 2013/04/12
  • Evaluation of control mechanisms for Saccharomyces cerevisiae central metabolic reactions using metabolome data of eight single-gene deletion mutants, Tomokazu Shirai,Fumio Matsuda,Mami Okamoto,Akihiko Kondo, APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, SPRINGER, Vol. 97, No. 8, p. 3569-3577, 2013/04
  • PRIMe Update: Innovative content for plant metabolomics and integration of gene expression and metabolite accumulation, Tetsuya Sakurai,Yutaka Yamada,Yuji Sawada,Fumio Matsuda,Kenji Akiyama,Kazuo Shinozaki,Masami Yokota Hirai,Kazuki Saito, Plant and Cell Physiology, Vol. 54, No. 2, 2013/02
  • Implementation of a transhydrogenase-like shunt to counter redox imbalance during xylose fermentation in Saccharomyces cerevisiae, Hiroyuki Suga,Fumio Matsuda,Tomohisa Hasunuma,Jun Ishii,Akihiko Kondo, APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, SPRINGER, Vol. 97, No. 4, p. 1669-1678, 2013/02
  • Ability of a perfluoropolymer membrane to tolerate by-products of ethanol fermentation broth from dilute acid-pretreated rice straw, Kengo Sasaki,Fumio Matsuda,Tomohisa Hasunuma,Chiaki Ogino,Masakatsu Urairi,Kazuhito Yoshida,Akihiko Kondo, Biochemical Engineering Journal, Vol. 70, p. 135-139, 2013/01/15
  • メタボローム&ndash;QTL解析を用いた玄米代謝物組成にかかわる自然変異の探索:コメ品質の遺伝的な差をメタボローム分析で探索する, 松田 史生,岡咲 洋三,斉藤 和季, 化学と生物, 公益社団法人 日本農芸化学会, Vol. 51, No. 12, p. 792-794, 2013
  • Development of microbial cell factories for bio-refinery through synthetic bioengineering, Akihiko Kondo,Jun Ishii,Kiyotaka Y. Hara,Tomohisa Hasunuma,Fumio Matsuda, JOURNAL OF BIOTECHNOLOGY, ELSEVIER SCIENCE BV, Vol. 163, No. 2, p. 204-216, 2013/01
  • Changes in primary and secondary metabolite levels in response to gene targeting-mediated site-directed mutagenesis of the anthranilate synthase gene in rice, Hiroaki Saika,Akira Oikawa,Ryo Nakabayashi,Fumio Matsuda,Kazuki Saito,Seiichi Toki, Metabolites, MDPI AG, Vol. 2, No. 4, p. 1123-1138, 2012/12/18
  • RIKEN tandem mass spectral database (ReSpect) for phytochemicals: A plant-specific MS/MS-based data resource and database, Yuji Sawada,Ryo Nakabayashi,Yutaka Yamada,Makoto Suzuki,Muneo Sato,Akane Sakata,Kenji Akiyama,Tetsuya Sakurai,Fumio Matsuda,Toshio Aoki,Masami Yokota Hirai,Kazuki Saito, Phytochemistry, Vol. 82, p. 38-45, 2012/10
  • Design of superior cell factories for a sustainable biorefinery by synthetic bioengineering, Tomohisa Hasunuma,Fumio Matsuda,Akihiko Kondo, Systems Metabolic Engineering, Springer Netherlands, Vol. 9789400745346, p. 329-348, 2012/08/01
  • Genetic engineering to enhance the Ehrlich pathway and alter carbon flux for increased isobutanol production from glucose by Saccharomyces cerevisiae, Takashi Kondo,Hironori Tezuka,Jun Ishii,Fumio Matsuda,Chiaki Ogino,Akihiko Kondo, Journal of Biotechnology, Vol. 159, No. 1-2, p. 32-37, 2012/05/31
  • Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis, Fumio Matsuda,Yozo Okazaki,Akira Oikawa,Miyako Kusano,Ryo Nakabayashi,Jun Kikuchi,Jun-Ichi Yonemaru,Kaworu Ebana,Masahiro Yano,Kazuki Saito, Plant Journal, Vol. 70, No. 4, p. 624-636, 2012/05
  • Widely targeted metabolic profiling analysis of yeast central metabolites, Hiroko Kato,Yoshihiro Izumi,Tomohisa Hasunuma,Fumio Matsuda,Akihiko Kondo, JOURNAL OF BIOSCIENCE AND BIOENGINEERING, SOC BIOSCIENCE BIOENGINEERING JAPAN, Vol. 113, No. 5, p. 665-673, 2012/05
  • Synergistic enhancement of glycogen production in Arthrospira platensis by optimization of light intensity and nitrate supply, Shimpei Aikawa,Yoshihiro Izumi,Fumio Matsuda,Tomohisa Hasunuma,Jo-Shu Chang,Akihiko Kondo, BIORESOURCE TECHNOLOGY, ELSEVIER SCI LTD, Vol. 108, p. 211-215, 2012/03
  • Coupled transcript-metabolite profiling: Towards systems biology approaches to unravel regulation of seed secondary metabolism, Thierry Joët,Eleanore T. Wurtzel,Fumio Matsuda,Kazuki Saito,Stéphane Dussert, Seed Development: OMICS Technologies Toward Improvement of Seed Quality and Crop Yield: OMICS in Seed Biology, Springer Netherlands, p. 367-385, 2012/01/01
  • Two glycosyltransferases involved in anthocyanin modification delineated by transcriptome independent component analysis in Arabidopsis thaliana, Keiko Yonekura-Sakakibara,Atsushi Fukushima,Ryo Nakabayashi,Kousuke Hanada,Fumio Matsuda,Satoko Sugawara,Eri Inoue,Takashi Kuromori,Takuya Ito,Kazuo Shinozaki,Bunyapa Wangwattana,Mami Yamazaki,Kazuki Saito, Plant Journal, Vol. 69, No. 1, p. 154-167, 2012/01
  • Construction of an artificial pathway for isobutanol biosynthesis in the cytosol of saccharomyces cerevisiae, Fumio Matsuda,Takashi Kondo,Kengo Ida,Hironori Tezuka,Jun Ishii,Akihiko Kondo, Bioscience, Biotechnology and Biochemistry, Vol. 76, No. 11, p. 2139-2141, 2012
  • Effects of freeze-drying of samples on metabolite levels in metabolome analyses, Akira Oikawa,Takao Otsuka,Yusuke Jikumaru,Shinjiro Yamaguchi,Fumio Matsuda,Ryo Nakabayashi,Tadashi Takashina,Kanji Isuzugawa,Kazuki Saito,Katsuhiro Shiratake, Journal of Separation Science, Vol. 34, No. 24, p. 3561-3567, 2011/12
  • Comparative Profiling Analysis of Central Metabolites in Euglena gracilis under Various Cultivation Conditions, Fumio Matsuda,Masahiro Hayashi,Akihiko Kondo, BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, TAYLOR & FRANCIS LTD, Vol. 75, No. 11, p. 2253-2256, 2011/11
  • Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics, Henning Redestig,Miyako Kusano,Kaworu Ebana,Makoto Kobayashi,Akira Oikawa,Yozo Okazaki,Fumio Matsuda,Masanori Arita,Naoko Fujita,Kazuki Saito, BMC Systems Biology, Vol. 5, 2011/10/28
  • Metabolomics of a single vacuole reveals metabolic dynamism in an alga Chara australis, Akira Oikawa,Fumio Matsuda,Munehiro Kikuyama,Tetsuro Mimura,Kazuki Saito, Plant Physiology, Vol. 157, No. 2, p. 544-551, 2011/10
  • Repeated-batch fermentation of lignocellulosic hydrolysate to ethanol using a hybrid Saccharomyces cerevisiae strain metabolically engineered for tolerance to acetic and formic acids, Tomoya Sanda,Tomohisa Hasunuma,Fumio Matsuda,Akihiko Kondo, BIORESOURCE TECHNOLOGY, ELSEVIER SCI LTD, Vol. 102, No. 17, p. 7917-7924, 2011/09
  • Engineering strategy of yeast metabolism for higher alcohol production, Fumio Matsuda,Chikara Furusawa,Takashi Kondo,Jun Ishii,Hiroshi Shimizu,Akihiko Kondo, MICROBIAL CELL FACTORIES, BIOMED CENTRAL LTD, Vol. 10, 2011/09
  • Mass spectra-based framework for automated structural elucidation of metabolome data to explore phytochemical diversity, Fumio Matsuda,Ryo Nakabayashi,Yuji Sawada,Makoto Suzuki,Masami Y. Hirai,Shigehiko Kanaya,Kazuki Saito, Frontiers in Plant Science, Frontiers Research Foundation, Vol. 2, 2011/08/22
  • Enzymatic glutathione production using metabolically engineered Saccharomyces cerevisiae as a whole-cell biocatalyst, Hideyo Yoshida,Kiyotaka Y. Hara,Kentaro Kiriyama,Hideki Nakayama,Fumiyoshi Okazaki,Fumio Matsuda,Chiaki Ogino,Hideki Fukuda,Akihiko Kondo, APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, SPRINGER, Vol. 91, No. 4, p. 1001-1006, 2011/08
  • Variation in Biomass Properties among Rice Diverse Cultivars, Fumio Matsuda,Masanori Yamasaki,Tomohisa Hasunuma,Chiaki Ogino,Akihiko Kondo, BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, TAYLOR & FRANCIS LTD, Vol. 75, No. 8, p. 1603-1605, 2011/08
  • Metabolomics reveals comprehensive reprogramming involving two independent metabolic responses of Arabidopsis to UV-B light, Miyako Kusano,Takayuki Tohge,Atsushi Fukushima,Makoto Kobayashi,Naomi Hayashi,Hitomi Otsuki,Youichi Kondou,Hiroto Goto,Mika Kawashima,Fumio Matsuda,Rie Niida,Minami Matsui,Kazuki Saito,Alisdair R. Fernie, Plant Journal, Vol. 67, No. 2, p. 354-369, 2011/07
  • Application of gene targeting to designed mutation breeding of high-tryptophan rice, Hiroaki Saika,Akira Oikawa,Fumio Matsuda,Haruko Onodera,Kazuki Saito,Seiichi Toki, Plant Physiology, Vol. 156, No. 3, p. 1269-1277, 2011/07
  • Efficient fermentation of xylose to ethanol at high formic acid concentrations by metabolically engineered Saccharomyces cerevisiae, Tomohisa Hasunuma,Kyung-mo Sung,Tomoya Sanda,Kazuya Yoshimura,Fumio Matsuda,Akihiko Kondo, APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, SPRINGER, Vol. 90, No. 3, p. 997-1004, 2011/05
  • Metabolomics in Plant Biotechnology, Yozo Okazaki,Akira Oikawa,Miyako Kusano,Fumio Matsuda,Kazuki Saito, Plant Metabolism and Biotechnology, John Wiley and Sons, p. 373-388, 2011/03/28
  • Covering chemical diversity of genetically-modified tomatoes using metabolomics for objective substantial equivalence assessment, Miyako Kusano,Henning Redestig,Tadayoshi Hirai,Akira Oikawa,Fumio Matsuda,Atsushi Fukushima,Masanori Arita,Shin Watanabe,Megumu Yano,Kyoko Hiwasa-Tanase,Hiroshi Ezura,Kazuki Saito, PLoS ONE, Vol. 6, No. 2, 2011
  • Metabolomics for functional genomics, systems biology, and biotechnology, Kazuki Saito,Fumio Matsuda, Annual Review of Plant Biology, Vol. 61, p. 463-489, 2010/06/02
  • Metabolic profiling and cytological analysis of proanthocyanidins in immature seeds of Arabidopsis thaliana flavonoid accumulation mutants, Satoshi Kitamura,Fumio Matsuda,Takayuki Tohge,Keiko Yonekura-Sakakibara,Mami Yamazaki,Kazuki Saito,Issay Narumi, PLANT JOURNAL, WILEY-BLACKWELL, Vol. 62, No. 4, p. 549-559, 2010/05
  • Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis, Henning Redestig,Miyako Kusano,Atsushi Fukushima,Fumio Matsuda,Kazuki Saito,Masanori Arita, BMC Bioinformatics, Vol. 11, 2010/04/29
  • AtMetExpress development: A phytochemical atlas of Arabidopsis development, Fumio Matsuda,Masami Y. Hirai,Eriko Sasaki,Kenji Akiyama,Keiko Yonekura-Sakakibara,Nicholas J. Provart,Tetsuya Sakurai,Yukihisa Shimada,Kazuki Saito, Plant Physiology, Vol. 152, No. 2, p. 566-578, 2010/02
  • MassBank: A public repository for sharing mass spectral data for life sciences, Hisayuki Horai,Masanori Arita,Shigehiko Kanaya,Yoshito Nihei,Tasuku Ikeda,Kazuhiro Suwa,Yuya Ojima,Kenichi Tanaka,Satoshi Tanaka,Ken Aoshima,Yoshiya Oda,Yuji Kakazu,Miyako Kusano,Takayuki Tohge,Fumio Matsuda,Yuji Sawada,Masami Yokota Hirai,Hiroki Nakanishi,Kazutaka Ikeda,Naoshige Akimoto,Takashi Maoka,Hiroki Takahashi,Takeshi Ara,Nozomu Sakurai,Hideyuki Suzuki,Daisuke Shibata,Steffen Neumann,Takashi Iida,Ken Tanaka,Kimito Funatsu,Fumito Matsuura,Tomoyoshi Soga,Ryo Taguchi,Kazuki Saito,Takaaki Nishioka, Journal of Mass Spectrometry, John Wiley and Sons Ltd, Vol. 45, No. 7, p. 703-714, 2010
  • Metabolic profiling analysis of genetically modified rice seedlings that overproduce tryptophan reveals the occurrence of its inter-tissue translocation, Fumio Matsuda,Atsushi Ishihara,Kojiro Takanashi,Keiko Morino,Haruna Miyazawa,Kyo Wakasa,Hisashi Miyagawa, Plant Biotechnology, Japanese Society for Plant Cell and Molecular Biology, Vol. 27, No. 1, p. 17-27, 2010
  • Expression of bacterial tyrosine ammonia-lyase creates a novel p-coumaric acid pathway in the biosynthesis of phenylpropanoids in Arabidopsis, Yasutaka Nishiyama,Choong-Soo Yun,Fumio Matsuda,Tadamasa Sasaki,Kazuki Saito,Yuzuru Tozawa, Planta, Vol. 232, No. 1, p. 209-218, 2010
  • Evaluation of amino acid content and nutritional quality of transgenic soybean seeds with high-level tryptophan accumulation, Masao Ishimoto,Shaikh M. Rahman,Moemen S. Hanafy,Mutasim M. Khalafalla,Hany A. El-Shemy,Yumi Nakamoto,Yoichi Kita,Kojiro Takanashi,Fumio Matsuda,Yoshihiro Murano,Tomoko Funabashi,Hisashi Miyagawa,Kyo Wakasa, Molecular Breeding, Vol. 25, No. 2, p. 313-326, 2010/01
  • Members of the LBD Family of Transcription Factors Repress Anthocyanin Synthesis and Affect Additional Nitrogen Responses in Arabidopsis, Grit Rubin,Takayuki Tohge,Fumio Matsuda,Kazuki Saito,Wolf-Ruediger Scheible, PLANT CELL, AMER SOC PLANT BIOLOGISTS, Vol. 21, No. 11, p. 3567-3584, 2009/11
  • Assessment of metabolome annotation quality: A method for evaluating the false discovery rate of elemental composition searches, Fumio Matsuda,Yoko Shinbo,Akira Oikawa,Masami Yokota Hirai,Oliver Flehn,Shigehiko Kanaya,Kazuki Saito, PLoS ONE, Vol. 4, No. 10, 2009/10/16
  • A Chloroplastic UDP-Glucose Pyrophosphorylase from Arabidopsis Is the Committed Enzyme for the First Step of Sulfolipid Biosynthesis, Okazaki Yozo,Shimojima Mie,Sawada Yuji,Toyooka Kiminori,Narisawa Tomoko,Mochida Keiichi,Tanaka Hironori,Matsuda Fumio,Hirai Akiko,Hirai Masami Yokota,Ohta Hiroyuki,Saito Kazuki, PLANT CELL, American Society of Plant Biologists (ASPB), Vol. 21, No. 3, p. 892-909, 2009/03
  • MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites, Fumio Matsuda,Keiko Yonekura-Sakakibara,Rie Niida,Takashi Kuromori,Kazuo Shinozaki,Kazuki Saito, Plant Journal, Vol. 57, No. 3, p. 555-577, 2009/02
  • Visualization of metabolite identifier information, Matsuda Fumio,Redestig Henning,Sawada Yuji,Shinbo Yoko,Hirai Masami Yokota,Kanaya Shigehiko,Saito Kazuki, Plant Biotechnology, Japanese Society for Plant Cell and Molecular Biology, Vol. 26, No. 5, p. 479-483, 2009
  • Rice metabolomics, Akira Oikawa,Fumio Matsuda,Miyako Kusano,Yozo Okazaki,Kazuki Saito, Rice, Vol. 1, No. 1, p. 63-71, 2008/09
  • Comprehensive flavonol profiling and transcriptome coexpression analysis leading to decoding gene-metabolite correlations in Arabidopsis, Keiko Yonekura-Sakakibara,Takayuki Tohge,Fumio Matsuda,Ryo Nakabayashi,Hiromitsu Takayama,Rie Niida,Akiko Watanabe-Takahashi,Eri Inoue,Kazuki Saito, Plant Cell, Vol. 20, No. 8, p. 2160-2176, 2008/08
  • Mutation of a rice gene encoding a phenylalanine biosynthetic enzyme results in accumulation of phenylalanine and tryptophan, Tetsuya Yamada,Fumio Matsuda,Koji Kasai,Shuichi Fukuoka,Keisuke Kitamura,Yuzuru Tozawa,Hisashi Miyagawa,Kyo Wakasa, Plant Cell, Vol. 20, No. 5, p. 1316-1329, 2008/05
  • The tryptophan pathway is involved in the defense responses of rice against pathogenic infection via serotonin production, Atsushi Ishihara,Yumi Hashimoto,Chihiro Tanaka,Joseph G. Dubouzet,Takahito Nakao,Fumio Matsuda,Takaaki Nishioka,Hisashi Miyagawa,Kyo Wakasa, Plant Journal, Vol. 54, No. 3, p. 481-495, 2008/05
  • Present Status of Metabolome Analysis and Future Perspective : 2. Data Processing Technologies, MATSUDA Fumio,OIKAWA Akira,KUSANO Miyako,KIKUCHI Jun,SAITO Kazuki, 化学と生物, 日本農芸化学会, Vol. 45, No. 12, p. 834-842, 2007/12/01
  • Present Status of Metabolome Analysis and Future Perspective : 1. Sample Preparation, Measurement Technologies, MATSUDA Fumio,OIKAWA Akira,KUSANO Miyako,KIKUCHI Jun,SAITO Kazuki, 化学と生物, 日本農芸化学会, Vol. 45, No. 11, p. 754-760, 2007/11/01
  • Integrated metabolomic and transcriptomic analyses of high-tryptophan rice expressing a mutant anthranilate synthase alpha subunit, Joseph G. Dubouzet,Atsushi Ishihara,Fumio Matsuda,Hisashi Miyagawa,Hiroyoshi Iwata,Kyo Wakasa, Journal of Experimental Botany, Vol. 58, No. 12, p. 3309-3321, 2007/10
  • Metabolomics for metabolically manipulated plants: Effects of tryptophan overproduction, Atsushi Ishihara,Fumio Matsuda,Hisashi Miyagawa,Kyo Wakasa, Metabolomics, Vol. 3, No. 3, p. 319-334, 2007/09
  • Metabolic flux analysis in plants using dynamic labeling technique: Application to tryptophan biosynthesis in cultured rice cells, Fumio Matsuda,Kyo Wakasa,Hisashi Miyagawa, Phytochemistry, Vol. 68, No. 16-18, p. 2290-2301, 2007/08
  • 【最新プロテオミクス・メタボロミクス 質量分析の基礎からバイオ医薬への応用】 メタボローム解析 マススペクトロメトリーによる植物メタボローム解析, 草野 都,峠 隆之,松田 史生,岡咲 洋三,及川 彰,斉藤 和季, 細胞工学, (株)学研メディカル秀潤社, Vol. 別冊, No. プロテオミクス・メタボロミクス, p. 146-156, 2007/07
  • Estimation of metabolic fluxes, expression levels and metabolite dynamics of a secondary metabolic pathway in potato using label pulse-feeding experiments combined with kinetic network modelling and simulation, Elmar Heinzle,Fumio Matsuda,Hisashi Miyagawa,Kyo Wakasa,Takaaki Nishioka, Plant Journal, Vol. 50, No. 1, p. 176-187, 2007/04
  • High-level tryptophan accumulation in seeds of transgenic rice and its limited effects on agronomic traits and seed metabolite profile, Kyo Wakasa,Hisakazu Hasegawa,Hiroshi Nemoto,Fumio Matsuda,Haruna Miyazawa,Yuzuru Tozawa,Keiko Morino,Akira Komatsu,Tetsuya Yamada,Teruhiko Terakawa,Hisashi Miyagawa, Journal of Experimental Botany, Vol. 57, No. 12, p. 3069-3078, 2006/09
  • Characterization of tryptophan-overproducing potato transgenic for a mutant rice anthranilate synthase α-subunit gene (OASA1D), Fumio Matsuda,Tetsuya Yamada,Haruna Miyazawa,Hisashi Miyagawa,Kyo Wakasa, Planta, Vol. 222, No. 3, p. 535-545, 2005/10
  • Quantification of indole-3-acetic acid and amino acid conjugates in rice by liquid chromatography-electrospray ionization-tandem mass spectrometry, Fumio Matsuda,Haruna Miyazawa,Kyo Wakasa,Hisashi Miyagawa, Bioscience, Biotechnology and Biochemistry, Vol. 69, No. 4, p. 778-783, 2005/04
  • Metabolic flux analysis of the phenylpropanoid pathway in elicitor-treated potato tuber tissue, Fumio Matsuda,Keiko Morino,Rieko Ano,Masaki Kuzawa,Kyo Wakasa,Hisashi Miyagawa, Plant and Cell Physiology, Vol. 46, No. 3, p. 454-466, 2005/03
  • Metabolic profiling of tryptophan-overproducing rice calli that express a feedback-insensitive α subunit of anthranilate synthase, Keiko Morino,Fumio Matsuda,Haruna Miyazawa,Akiko Sukegawa,Hisashi Miyagawa,Kyo Wakasa, Plant and Cell Physiology, Vol. 46, No. 3, p. 514-521, 2005/03
  • In vitro biosynthesis of volicitin in Spodoptera litura, Naoko Yoshinaga,Nobuyoshi Morigaki,Fumio Matsuda,Ritsuo Nishida,Naoki Mori, Insect Biochemistry and Molecular Biology, Vol. 35, No. 2, p. 175-184, 2005/02
  • Metabolism of avenanthramide phytoalexins in oats, Yozo Okazaki,Taishi Isobe,Yoichi Iwata,Tetsuya Matsukawa,Fumio Matsuda,Hisashi Miyagawa,Atsushi Ishihara,Takaaki Nishioka,Hajime Iwamura, Plant Journal, Vol. 39, No. 4, p. 560-572, 2004/08
  • Determination of potato glycoalkaloids using high-pressure liquid chromatography-electrospray ionisation/mass spectrometry, Fumio Matsuda,Keiko Morino,Haruna Miyazawa,Masahiro Miyashita,Hisashi Miyagawa, Phytochemical Analysis, Vol. 15, No. 2, p. 121-124, 2004/03
  • Metabolic flux analysis of the phenylpropanoid pathway in wound-healing potato tuber tissue using stable isotope-labeled tracer and LC-MS spectroscopy, F Matsuda,K Morino,M Miyashita,H Miyagawa, PLANT AND CELL PHYSIOLOGY, OXFORD UNIV PRESS, Vol. 44, No. 5, p. 510-517, 2003/05
  • Metabolic flux analysis of phenylpropanoid pathway in wound-healing potato tuber tissue, F Matsuda,H Miyagawa, PLANT AND CELL PHYSIOLOGY, OXFORD UNIV PRESS, Vol. 44, p. S192-S192, 2003
  • Involvement of reactive oxygen species in the induction of (S)-N-p-coumaroyloctopamine accumulation by beta-1,3-glucooligosaccharide elicitors in potato tuber tissues, F Matsuda,H Miyagawa,T Ueno, ZEITSCHRIFT FUR NATURFORSCHUNG C-A JOURNAL OF BIOSCIENCES, VERLAG Z NATURFORSCH, Vol. 56, No. 3-4, p. 228-234, 2001/03
  • beta-1,3-glucooligosaccharide induced activation of four enzymes responsible for N-p-coumaroyloctopamine biosynthesis in potato (Solanum tuberosum cv.) tuber tissue, F Matsuda,H Miyagawa,T Ueno, ZEITSCHRIFT FUR NATURFORSCHUNG SECTION C-A JOURNAL OF BIOSCIENCES, WALTER DE GRUYTER GMBH, Vol. 55, No. 5-6, p. 373-382, 2000/05
  • Absolute structure of N-p-coumaroyloctopamine in elicitor-treated potato tuber tissue, F Matsuda,H Miyagawa,T Ueno, BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, TAYLOR & FRANCIS LTD, Vol. 64, No. 3, p. 625-627, 2000/03
  • Molecular Breeding of a Tryptophan-Fortified Rice via Homologous Recombination-Mediated Gene Targeting Based on Protein Engineering, Hiroaki Saika,Akira Oikawa,Fumio Matsuda,Haruko Onodera,Kazuki Saito,Senichi Toki, IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL, SPRINGER, Vol. 46, p. S158-S159, 1970/01

Misc.

  • Practical Guide of MassBank Vol. 2, 松田史生,松田史生,三枝大輔,三枝大輔,西岡孝明, Journal of the Mass Spectrometry Society of Japan, Vol. 71, No. 1, 2023
  • Practical Guide of MassBank vol. 1, 松田史生,松田史生,三枝大輔,三枝大輔,西岡孝明, Journal of the Mass Spectrometry Society of Japan, Vol. 71, No. 1, 2023
  • LCMS-9030を用いた出芽酵母のノンターゲットリピドミクス, 松田史生, 脂質生化学研究, Vol. 65, 2023
  • Metabolic flux analysis of the central carbon metabolism in cultured cancer cells, 松田史生, 日本プロテオーム学会大会プログラム・抄録集, Vol. 2023 (CD-ROM), 2023
  • Peakintelligence Peak Picking Software that Uses Deep Learning for LC-MS/MS, 金澤慎司,金澤慎司,山田洋平,安田弘之,國澤研大,國澤研大,塩浜徹,梶原茂樹,向紀雄,垣迫正輝,藤澤剛,山影譲,飯田順子,飯田順子,松田史生,松田史生, 島津評論, Vol. 78, No. 3-4, 2022
  • ショウジョウバエから分離された野生酵母の分類と多様性, 清家泰介,清家泰介,清家泰介,武方宏樹,阪田奈津枝,小谷葉月,古澤力,古澤力,松田史生,松田史生, 日本ゲノム微生物学会年会要旨集, Vol. 16th (Web), 2022
  • ロドプシンによる光駆動プロトンポンプが大腸菌の弱酸耐性に及ぼす影響, 小林祐摩,佐野海瑚人,弘埜陽子,松田史生,石井純,原清敬,戸谷吉博,清水浩, 化学工学会年会研究発表講演要旨集(CD-ROM), Vol. 87th, 2022
  • ロドプシンを利用した光駆動ATP再生によるイソプレノールおよび3ヒドロキシプロピオン酸生産の向上, 戸谷吉博,佐野海瑚人,田中涼,鎌田健太郎,松田史生,石井純,弘埜陽子,原清敬,清水浩, 化学工学会年会研究発表講演要旨集(CD-ROM), Vol. 87th, 2022
  • 代謝フラックス解析を用いたがん幹細胞特異的代謝の解明, 岡橋伸幸,清水浩,松田史生,谷口赳夫,西本和生, 金沢大学がん進展制御研究所がんの転移・薬剤耐性に関わる先導的共同研究拠点, Vol. 2021, 2022
  • Improvement in the compositional formula estimation by integration of DDA data, 松田史生,松田史生,松田史生,小森柊花,原大樹,山田侑季,岡橋伸幸,岡橋伸幸,岡橋伸幸, 質量分析総合討論会講演要旨集, Vol. 70th, 2022
  • <sup>13</sup>C-tracer Analysis of Phospholipids by LC-QTOF/MS, 山田侑季,村上慶多,岡橋伸幸,岡橋伸幸,岡橋伸幸,遠山敦彦,飯田順子,飯田順子,松田史生,松田史生,松田史生, 質量分析総合討論会講演要旨集, Vol. 70th, 2022
  • Quantification of glycerophospholipid isomers using data-independent acquisition (DIA), 原大樹,小森柊花,岡橋伸幸,岡橋伸幸,岡橋伸幸,遠山敦彦,飯田順子,飯田順子,松田史生,松田史生,松田史生, 質量分析総合討論会講演要旨集, Vol. 70th, 2022
  • Bacterial Rhodopsin reconstruction for improving bioproduction, 佐藤良樹,川崎真由,弘埜陽子,菊川寛史,菊川寛史,中野祥吾,石井純,松田史生,戸谷吉博,伊藤創平,原清敬,原清敬, 日本農芸化学会大会講演要旨集(Web), Vol. 2022, 2022
  • Metabolic response analyses in tamoxifen-treated breast cancer cell line MCF-7 using time-series metabolomics, 岡橋伸幸,岡橋伸幸,岡橋伸幸,西本和生,遠山敦彦,飯田順子,飯田順子,松田史生,松田史生,松田史生, 質量分析総合討論会講演要旨集, Vol. 70th, 2022
  • Keyword recommendation of molecular mechanisms based on metabolome data and the researcher’s knowledge, 松田史生,金澤慎司,金澤慎司,金澤慎司,山田洋平,清水悟司,梶原茂樹,向紀雄,飯田順子,飯田順子, 日本農芸化学会大会講演要旨集(Web), Vol. 2022, 2022
  • Untargeted analysis of lipid molecules involeved in the phenotypes of food industrial yeast, 小森柊花,岡橋伸幸,岡橋伸幸,岡橋伸幸,遠山敦彦,飯田順子,飯田順子,松田史生,松田史生,松田史生, 日本農芸化学会大会講演要旨集(Web), Vol. 2022, 2022
  • <sup>13</sup>C metabolic flux analysis of the central carbon metabolism in Saccharomyces cerevisiae supplemented with amino acids in the culture medium, 藤原逸人,岡橋伸幸,松田史生, 日本生物工学会大会講演要旨集, Vol. 74th, 2022
  • Data-independent acquisition (DIA)-based method for separation of structural isomers of lipids, 原大樹,小森柊花,岡橋伸幸,岡橋伸幸,岡橋伸幸,遠山敦彦,飯田順子,飯田順子,松田史生,松田史生,松田史生, 日本生物工学会大会講演要旨集, Vol. 74th, 2022
  • Development of exploring method for metabolic control point combining metabolome data and flux data, 丸山正晴,荒木千絵,岡橋伸幸,松田史生, 日本生物工学会大会講演要旨集, Vol. 74th, 2022
  • Comparative analysis of metabolic strategies among various yeast species, 清家泰介,KAHAR Prihardi,荻野千秋,松田史生, 日本生物工学会大会講演要旨集, Vol. 74th, 2022
  • Development of <sup>13</sup>C-tracer analysis of lipid metabolism in Saccharomyces cerevisiae, 山田侑季,村上慶多,岡橋伸幸,岡橋伸幸,岡橋伸幸,遠山敦彦,飯田順子,飯田順子,松田史生,松田史生,松田史生, 日本生物工学会大会講演要旨集, Vol. 74th, 2022
  • Development of a method for estimating enzyme genes and metabolites using genomic and metabolomic data., 岡橋伸幸,松田史生, 日本生物工学会大会講演要旨集, Vol. 74th, 2022
  • Development of quantitative analysis of central carbon metabolic pathway for the regulation of reactive oxygen species production capacity of neutrophils, 谷口赳夫,岡橋伸幸,松田史生, 日本生物工学会大会講演要旨集, Vol. 74th, 2022
  • Optimal production of mevalonate by modification of ribosome-binding sequences of Escherichia coli chromosome, 澤田将吾,松田史生,戸谷吉博,清水浩, 日本生物工学会大会講演要旨集, Vol. 74th, 2022
  • Targeted proteomics analysis of enzyme expression profiles in oleaginous yeast at growth and stationary phases, 岩倉崇文,清家泰介,岡橋伸幸,佐藤里佳子,高久洋暁,松田史生, 日本生物工学会大会講演要旨集, Vol. 74th, 2022
  • Improvement of bioalcohol production in Saccharomyces cerevisiae by ATP wasting, 谷田部楓太,岡橋伸幸,清家泰介,石井純,松田史生, 日本生物工学会大会講演要旨集, Vol. 74th, 2022
  • Effect of light-induced proton pump activity by rhodopsin on weak acid resistance in Escherichia coli., 小林祐摩,佐野海瑚人,弘埜陽子,松田史生,石井純,原清敬,戸谷吉博,清水浩, 日本生物工学会大会講演要旨集, Vol. 74th, 2022
  • Quantitative proteomics of central metabolic enzymes in response to modulation of glucose consumption rate in Corynebacterium glutamicum, 森下風香,浜岸麻衣,松田史生,豊田晃一,和田大,乾将行,横田篤,柘植陽太,柘植陽太, 日本生物工学会大会講演要旨集, Vol. 74th, 2022
  • 日本脳炎ウイルス感染細胞のエネルギー代謝制御機構の解明, 伊東祐美,岡橋伸幸,鈴木達也,松田史生,岡本徹, 日本ウイルス学会学術集会プログラム・予稿集(Web), Vol. 69th, 2022
  • Development of a method for estimating bacterial enzyme gene and metabolites by integrating omics data, 岡橋伸幸,松田史生, 日本分子生物学会年会プログラム・要旨集(Web), Vol. 45th, 2022
  • <sup>13</sup>C-tracer Analysis of Phospholipids by LC-QTOF/MS, 山田侑季,村上慶多,岡橋伸幸,岡橋伸幸,岡橋伸幸,遠山敦彦,飯田順子,飯田順子,松田史生,松田史生,松田史生, Journal of the Mass Spectrometry Society of Japan, Vol. 70, No. 4, 2022
  • Analysis of lipid acyl chain property in yeast under low temperature by DIA lipidomics, 原大樹,小森柊花,岡橋伸幸,岡橋伸幸,岡橋伸幸,遠山敦彦,飯田順子,飯田順子,松田史生,松田史生,松田史生, 日本分子生物学会年会プログラム・要旨集(Web), Vol. 45th, 2022
  • Investigation of enzymes highly expressed in lipid accumulation phase in Lipomyces starkeyi using targeted proteomics, 岩倉崇文,清家泰介,岡橋伸幸,佐藤里佳子,高久洋暁,松田史生, 日本分子生物学会年会プログラム・要旨集(Web), Vol. 45th, 2022
  • 大腸菌の染色体上リボゾーム結合部位改変を利用した中枢炭素代謝フラックスの精密制御, 澤田将吾,松田史生,戸谷吉博,清水浩, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), Vol. 53rd, 2022
  • Development of Multi-Omics Analysis Package, 山田洋平,安田弘之,金澤慎司,金澤慎司,堀江征司,山田真希,黒田博隆,AURORE Jaffuel,野田陽,梶原茂樹,種田克行,GHOSH Samik,松岡由希子,北野宏明,松田史生,松田史生,福崎英一郎,福崎英一郎,福崎英一郎,飯田順子,飯田順子, 島津評論, Vol. 78, No. 3-4, 2022
  • Metabolic adaptation analysis of respiratory chain-inhibited cancer cells and budding yeast, 澤井茜,清家泰介,岡橋伸幸,和泉自泰,馬場健史,松田史生, 日本分子生物学会年会プログラム・要旨集(Web), Vol. 44th, 2021
  • Central carbon metabolism pathway of neutrophils regulates reactive oxygen species production, 谷口赳夫,岡橋伸幸,松田史生, 日本分子生物学会年会プログラム・要旨集(Web), Vol. 44th, 2021
  • マルチオミクス解析パッケージの開発—Development of Multi-Omics Analysis Package—特集 先端技術特集, 山田 洋平,安田 弘之,金澤 慎司,堀江 征司,山田 真希,黒田 博隆,Jaffuel Aurore,野田 陽,梶原 茂樹,種田 克行,Samik Ghosh,松岡 由希子,北野 宏明,松田 史生,福崎 英一郎,飯田 順子, 島津評論 / 島津評論編集部 [編], Vol. 78, No. 3・4, p. 265-274, 2021
  • 代謝フラックス解析を用いたがん幹細胞特異的代謝の解明, 松田史生,清水浩,岡橋伸幸,丸山正晴, 金沢大学がん進展制御研究所がんの転移・薬剤耐性に関わる先導的共同研究拠点, Vol. 2020, 2021
  • Analyses of gram-negative bacteria component lipid A using LC-QTOF/MS, 岡橋伸幸,岡橋伸幸,岡橋伸幸,上田政宏,上田政宏,松田史生,松田史生,有田誠,有田誠,有田誠, 質量分析総合討論会講演要旨集, Vol. 69th, 2021
  • Untargeted Lipidomics of Industrial Yeast Strains by LC-QTOF/MS, 小森柊花,岡橋伸幸,岡橋伸幸,岡橋伸幸,小倉泰郎,飯田順子,飯田順子,松田史生,松田史生,松田史生, 質量分析総合討論会講演要旨集, Vol. 69th, 2021
  • Expansion the method for metabolite concentration using LC-MS/MS and its application to industrial budding yeast strains., 杉村政彦,岡橋伸幸,清家泰介,和泉自泰,馬場健史,松田史生, 質量分析総合討論会講演要旨集, Vol. 69th, 2021
  • <sup>13</sup>C-Metabolic Flux Analysis of THP1 Before and After Differentiation by Using Mass Spectrometry, 本谷真奈,谷口赳夫,岡橋伸幸,松田史生, 質量分析総合討論会講演要旨集, Vol. 69th, 2021
  • Improvement of proteomics assay for central carbon metabolism in human breast cancer cells, 高橋遼,西本和生,岡橋伸幸,松本雅記,松田史生, 質量分析総合討論会講演要旨集, Vol. 69th, 2021
  • Automated recommendation of molecular mechanisms based on metabolome data and the researcher’s knowledge, 松田史生,金澤慎司,金澤慎司,金澤慎司,山田洋平,清水悟司,梶原茂樹,向紀雄,飯田順子,飯田順子, バイオメディカル分析科学シンポジウム講演要旨集, Vol. 33rd, 2021
  • Application of <sup>13</sup>C-Metabolic flux analysis to the oleaginous yeast Yarrowia lipolytica, 松尾有紗,岡橋伸幸,清家泰介,荻野千秋,松田史生, 質量分析総合討論会講演要旨集, Vol. 69th, 2021
  • Development of isotopically nonstationary <sup>15</sup>N-metabolic flux analysis for nucleotide metabolism, 村上慶多,近藤佑哉,岡橋伸幸,松田史生, 質量分析総合討論会講演要旨集, Vol. 69th, 2021
  • Modulation of central metabolic flux by modification of ribosome-binding sequences of E. coli chromosomes, 澤田将吾,松田史生,戸谷吉博,清水浩, 日本生物工学会大会講演要旨集, Vol. 73rd, 2021
  • Metabolic analysis of budding yeast strains using Gibbs free energy change, 杉村政彦,清家泰介,岡橋伸幸,松田史生, 日本生物工学会大会講演要旨集, Vol. 73rd, 2021
  • Light-driven metabolic conversion from mevalonate to isoprenol in Escherichia coli, 佐野海瑚人,田中涼,鎌田健太郎,松田史生,石井純,弘埜陽子,原清敬,戸谷吉博,清水浩, 日本生物工学会大会講演要旨集, Vol. 73rd, 2021
  • Bacterial Rhodopsin reconstruction for improving proton pump activity, 佐藤良樹,川崎真由,弘埜陽子,菊川寛史,中野祥吾,石井純,松田史生,戸谷吉博,伊藤創平,原清敬, 日本生物工学会大会講演要旨集, Vol. 73rd, 2021
  • Analysis of metabolic changes during macrophage differentiation using <sup>13</sup>C metabolic flux analysis, 本谷真奈,谷口赳夫,岡橋伸幸,松田史生, 日本生物工学会大会講演要旨集, Vol. 73rd, 2021
  • Analysis of central carbon metabolism in neutrophils using <sup>13</sup>C-metabolic flux analysis and its application to functional regulation, 谷口赳夫,岡橋伸幸,松田史生, 日本生物工学会大会講演要旨集, Vol. 73rd, 2021
  • Analysis of lipid molecules contributing to industrial yeast phenotypes by untargeted lipidomics, 小森柊花,岡橋伸幸,岡橋伸幸,岡橋伸幸,小倉泰郎,飯田順子,飯田順子,松田史生,松田史生,松田史生, 日本生物工学会大会講演要旨集, Vol. 73rd, 2021
  • Retinal production by engineered Xanthophyllomyces dendrorhous, 藤野紗代,景山裕也,弘埜陽子,菊川寛史,菊川寛史,松田史生,戸谷吉博,石井純,原清敬,原清敬, 日本生物工学会大会講演要旨集, Vol. 73rd, 2021
  • Metabolic analysis of mevalonic acid-producing Escherichia coli expressing a light-driven proton pump, 松山千夏,清家泰介,岡橋伸幸,戸谷吉博,弘埜陽子,平山英伸,石井純,清水浩,原清敬,松田史生, 日本生物工学会大会講演要旨集, Vol. 73rd, 2021
  • <sup>13</sup>C-metabolic fluxes analysis of Yarrowia lipolytica in growth and stationary phases, 松尾有紗,岡橋伸幸,清家泰介,荻野千秋,松田史生, 日本生物工学会大会講演要旨集, Vol. 73rd, 2021
  • Improvement of targeted proteomics assay and metabolic evaluation of cell lines based on enzyme expression levels, 高橋遼,西本和生,岡橋伸幸,松田史生, 日本生物工学会大会講演要旨集, Vol. 73rd, 2021
  • Isolation of wild yeasts from Drosophila and future expansion of industrial applications, 清家泰介,清家泰介,清家泰介,武方宏樹,阪田奈津枝,古澤力,古澤力,松田史生,松田史生, 日本生物工学会大会講演要旨集, Vol. 73rd, 2021
  • Development of isotopically non-stationally <sup>15</sup>N-metabolic flux analysis and application for colorectal cancer cell lines in nitrogen metabolic pathway, 村上慶太,近藤佑哉,岡橋伸幸,松田史生, 日本生物工学会大会講演要旨集, Vol. 73rd, 2021
  • A dirigent protein AtDP1 and a laccase AtLAC5 responsible for biosynthesis of neolignans in Arabidopsis seed coats, 榊原圭子,山村正臣,松田史生,小埜栄一郎,中林亮,菅原聡子,森哲哉,飛松裕基,梅澤俊明,梅澤俊明,斉藤和季,斉藤和季, 日本植物生理学会年会(Web), Vol. 62nd, 2021
  • 次世代のバイオ計測はこれだ!(前編)~次世代,未来のバイオ計測技術~特集によせて, 内山進,松田史生,馬場健史, 生物工学会誌, Vol. 99, No. 5, 2021
  • 次世代のバイオ計測はこれだ!(前編)~次世代,未来のバイオ計測技術~質量分析法を使った未知代謝物の計測と同定, 岡橋伸幸,岡橋伸幸,松田史生,有田誠,有田誠,有田誠, 生物工学会誌, Vol. 99, No. 5, 2021
  • Future plan of metabolomics, 松田史生, 日本農芸化学会大会講演要旨集(Web), Vol. 2021, 2021
  • Comparative metabolic flux analysis of industrial yeast strains revealed the high fermentation performance accompanied the metabolic heat generation, 谷田部楓太,岡橋伸幸,清家泰介,松田史生, 日本農芸化学会大会講演要旨集(Web), Vol. 2021, 2021
  • Dynamic modeling of cyanobacteria central metabolism using enzyme expression data, 松田史生, 日本プロテオーム学会大会プログラム・抄録集, Vol. 2021 (CD-ROM), 2021
  • Hypothesis generation and verification by quantitative analysis of cancer metabolism, 松田史生, 実験医学, Vol. 39, No. 11, 2021
  • <sup>13</sup>C-Metabolic flux analysis of HL-60 myeloid leukemia cells using mass spectrometry, 谷口赳夫,岡橋伸幸,松田史生, 質量分析総合討論会講演要旨集, Vol. 68th, 2020
  • Structure estimation of gram-negative gut bacterial lipid A using untargeted analysis, 岡橋伸幸,岡橋伸幸,松田史生,有田誠,有田誠, 質量分析総合討論会講演要旨集, Vol. 68th, 2020
  • Time series metabolome analysis of MCF-7 human breast cancer cells during respiratory chain inhibition, 澤井茜,辻周真,岡橋伸幸,松田史生, 質量分析総合討論会講演要旨集, Vol. 68th, 2020
  • Clarify of cancer drug response mechanism by metabolic profile time resolved analysis, 西本和生,丸山正晴,岡橋伸幸,松田史生, 質量分析総合討論会講演要旨集, Vol. 68th, 2020
  • Reading mass spectra using public database, 松田史生, 質量分析総合討論会講演要旨集, Vol. 68th, 2020
  • <sup>13</sup>C-Metabolic flux analysis of colorectal cancer cells using mass spectrometry, 近藤佑哉,島知輝,岡橋伸幸,松田史生, 質量分析総合討論会講演要旨集, Vol. 68th, 2020
  • <sup>13</sup>C代謝フラックス解析法による出芽酵母実用株の代謝比較, 谷田部楓太,岡橋伸幸,松田史生, 日本ゲノム微生物学会年会要旨集, Vol. 14th, 2020
  • Improvement of <sup>13</sup>C Metabolic Flux Analysis by measuring cell components., 谷田部楓太,岡橋伸幸,松田史生, 質量分析総合討論会講演要旨集, Vol. 68th, 2020
  • Analysis of deltarhodopsin mutant, 佐藤良樹,弘埜陽子,石井純,柘植謙爾,松田史生,戸谷吉博,原清敬, 日本農芸化学会大会講演要旨集(Web), Vol. 2020, 2020
  • Improvement of bioproduction with ATP recycling by delta-rhodopsin, 塩澤優稀,弘埜陽子,石井純,柘植謙爾,松田史生,戸谷吉博,原清敬, 日本農芸化学会大会講演要旨集(Web), Vol. 2020, 2020
  • Visualization of metabolic flows by mass spectrometry, 岡橋伸幸,松田史生, 日本農芸化学会大会講演要旨集(Web), Vol. 2020, 2020
  • Effects of Organic Solvents on Cancer Metabolism, 西本和生,丸山正晴,岡橋伸幸,松田史生, Journal of the Mass Spectrometry Society of Japan, Vol. 68, No. 6, 2020
  • 好中球の代謝と分化・免疫機能の関係性解明, 谷口赳夫,岡橋伸幸,松田史生, 日本分子生物学会年会プログラム・要旨集(Web), Vol. 43rd, 2020
  • SBmap:メタボロームデータを可視化するための代謝マップ, 松田史生,辻周真,澤井茜,岡橋伸幸, 日本分子生物学会年会プログラム・要旨集(Web), Vol. 43rd, 2020
  • ターゲットプロテオミクスを用いたスマートセルの評価, 松田 史生, バイオサイエンスとインダストリー, Vol. 77, No. 6, p. 514-515, 2019/11
  • 代謝プロファイル時系列分析によるがん薬剤耐性化機構の解明, 丸山正晴,荒木千絵,岡橋伸幸,松田史生, 質量分析総合討論会講演要旨集, Vol. 67th, 2019
  • 質量分析を用いたがん代謝の計測-非上皮性細胞由来がんの代謝フラックス解析, 島知輝,丸山正晴,岡橋伸幸,松田史生, 質量分析総合討論会講演要旨集, Vol. 67th, 2019
  • 遺伝情報が複雑化したRNAによる単純な情報をもつRNA集団への侵入, 植田健介,水内良,松田史生,市橋伯一, 日本進化学会大会プログラム・講演要旨集(Web), Vol. 21st, 2019
  • NEDOスマートセルプロジェクト(1)ハイスループット合成・分析・評価手法の開発 高精度定量ターゲットプロテオーム解析技術の開発 複数酵素タンパク質発現量の一斉定量技術の開発, 松田史生, バイオサイエンスとインダストリー, Vol. 77, No. 6, 2019
  • 代謝階層をまたいだ計測の意義とデータ可視化の役割, 松田史生, 日本生物工学会大会講演要旨集, Vol. 71st, 2019
  • 光駆動ATP再生系を導入したVmax細胞の開発, 弘埜陽子,戸谷吉博,石井純,柘植謙爾,松田史生,原清敬, 日本農芸化学会大会講演要旨集(Web), Vol. 2019, 2019
  • デルタロドプシン発現が出芽酵母の代謝に及ぼす影響, 大塚健介,弘埜陽子,石井寛子,石井純,岡橋伸幸,戸谷吉博,原清敬,松田史生, 日本生物工学会大会講演要旨集, Vol. 71st, 2019
  • ロドプシンを利用した大腸菌における光駆動ATP再生の物質生産への応用, 田中涼,鎌田健太郎,戸谷吉博,松田史生,石井純,柘植謙爾,弘埜陽子,原清敬,清水浩, 日本生物工学会大会講演要旨集, Vol. 71st, 2019
  • 出芽酵母におけるGID複合体遺伝子の変異がリンゴ酸生成とタンパク質発現に与える影響, 根来宏明,松村憲吾,松田史生,清水浩,秦洋二,石田博樹, 日本生物工学会大会講演要旨集, Vol. 71st, 2019
  • 大腸菌による物質生産への光駆動ATP再生の利用に向けて, 田中涼,鎌田健太郎,戸谷吉博,松田史生,石井純,柘植謙爾,弘埜陽子,原清敬,清水浩, 化学工学会年会研究発表講演要旨集(CD-ROM), Vol. 84th, 2019
  • 定量プロテオミクスによる代謝酵素タンパク質定量分析, 松田史生, 日本プロテオーム学会大会プログラム・抄録集, Vol. 2019, 2019
  • Trans-omics analysis of plant responses to drought stress, 平井優美,シリワッ ラットクラオ,松田史生,矢野健太郎, 日本生化学会大会(Web), Vol. 92nd, 2019
  • 出芽酵母の代謝制御機構解明のための相関ネットワークの構築, 山崎一輝,丸山正晴,西野駿佑,岡橋伸幸,清水浩,松田史生, 日本分子生物学会年会プログラム・要旨集(Web), Vol. 42nd, 2019
  • 糖リン酸の精密計測が明らかにする中心代謝フラックス, 岡橋 伸幸,松田 史生, バイオサイエンスとインダストリー, バイオインダストリー協会, Vol. 77, No. 2, p. 116-118, 2019
  • メタボロミクスデータの統合に向けた代謝物相対定量値の実験室間比較, 和泉自泰,松田史生,平山明由,池田和貴,北芳博,堀江勘太,馬場健史,小田吉哉, 質量分析総合討論会講演要旨集, Vol. 66th, 2018
  • 協力関係にある2種類のRNA,一本化RNAの相対適応度に栄養制限条件が及ぼす影響, 植田健介,水内良,松田史生,市橋伯一, 日本進化学会大会プログラム・講演要旨集(Web), Vol. 20th, 2018
  • 安定同位体非定常の<sup>13</sup>C代謝フラックス解析およびプロテオーム解析によるn-ブタノールを生産するSynechococcus elongatus PCC7942の代謝状態の推定, 和田圭介,植林希代加,戸谷吉博,傳寶雄大,PUTRI Sastia,松田史生,福崎英一郎,LIAO James C,清水浩, 化学工学会年会研究発表講演要旨集(CD-ROM), Vol. 83rd, 2018
  • FBAを用いた出芽酵母のメバロン酸経路強化遺伝子破壊の探索と評価, 神田義貴,戸谷吉博,松田史生,清水浩, 日本農芸化学会大会講演要旨集(Web), Vol. 2018, 2018
  • 代謝工学による光合成の統合解析と工学応用, 豊島正和,戸谷吉博,松田史生,清水浩, 日本生物工学会大会講演要旨集, Vol. 70th, 2018
  • 増殖連動型物質生産のin silico解析における反応律速点の同定法の開発と実験検証, 清水浩,徳山健斗,戸谷吉博,松田史生, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), Vol. 50th, 2018
  • 大腸菌によるメバロン酸高生産のための流加培養条件の評価, 前田健仁,戸谷吉博,松田史生,清水浩, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), Vol. 50th, 2018
  • ロドプシンを利用した大腸菌における光駆動ATP再生, 鎌田健太郎,戸谷吉博,弘埜陽子,原清敬,松田史生,清水浩, 日本生物工学会大会講演要旨集, Vol. 70th, 2018
  • 遺伝子発現と共役するゲノムDNA複製系をin vitroで確立する, 酒谷佳寛,松田史生,市橋伯一, 日本生物工学会大会講演要旨集, Vol. 70th, 2018
  • シロイヌナズナの種子特異的ネオリグナンの生合成系の解明, 榊原圭子,山村正臣,松田史生,小埜栄一郎,森哲哉,中林亮,菅原聡子,鈴木実,梅澤俊明,斉藤和季,斉藤和季, 日本植物生理学会年会(Web), Vol. 59th, 2018
  • 実験進化により非転写後修飾リボソームRNAの翻訳活性を向上する, 江田航平,村瀬由樹,松田史生,市橋伯一, 日本進化学会大会プログラム・講演要旨集(Web), Vol. 20th, 2018
  • 光駆動ATP再生系によるVmax細胞の創製, 弘埜陽子,戸谷吉博,YE Xiaoting,石井純,柘植謙爾,松田史生,原清敬, 日本生物工学会大会講演要旨集, Vol. 70th, 2018
  • クラミドモナス光化学系の定量プロテオミクス法の開発, 大西一輝,徳丸雄磨,得津隆太郎,皆川純,豊島正和,松田史夫,清水浩, 日本農芸化学会大会講演要旨集(Web), Vol. 2018, 2018
  • 出芽酵母2,3-ブタンジオール生産に向けた不活性型Cas9によるエタノール生合成経路の抑制, 森田啓介,松田史生,石井純,近藤昭彦,清水浩, 日本生物工学会大会講演要旨集, Vol. 70th, 2018
  • ミトコンドリア代謝の抑制による出芽酵母2,3-ブタンジオール生産能力の向上, 森田啓介,松田史生,岡本浩二,石井純,近藤昭彦,清水浩, 日本農芸化学会大会講演要旨集(Web), Vol. 2018, 2018
  • 様々な波長の光照射下におけるシアノバクテリアの解析, 豊島正和,阪田真澄,戸谷吉博,松田史生,清水浩, 日本生物工学会大会講演要旨集, Vol. 70th, 2018
  • Hydrophilic Metabolite Analysis, Vol. 65, No. 5, p. 195-198, 2017/10
  • Analysis of Metabolic Dynamics in Metabolomics: Measurement of Metabolic Dynamics by Mass Spectrometry <I>via</I> Isotope Labeling Kinetic, Yasumune Nakayama,Fumio Matsuda, Journal of the mass spectrometry society of japan, 一般社団法人 日本質量分析学会, Vol. 65, No. 5, p. 210-214, 2017/08
  • 出芽酵母のメバロン酸経路の強化に有効な遺伝子破壊の探索, 神田義貴,戸谷吉博,松田史生,清水浩, 化学工学会年会研究発表講演要旨集(CD-ROM), Vol. 82nd, 2017
  • <sup>13</sup>C代謝フラックス解析およびプロテオーム解析を用いたn-ブタノール生産シアノバクテリア株の代謝解析, 和田圭介,植林希代加,戸谷吉博,傳寶雄大,PUTRI Sastia,松田史生,福崎英一郎,LIAO James,清水浩, 日本生物工学会大会講演要旨集, Vol. 69th, 2017
  • シアノバクテリアSynechocystis sp.PCC6803の光化学反応を精緻化したゲノムスケールモデルを用いた様々な光条件における代謝シミュレーション, 豊島正和,戸谷吉博,松田史生,清水浩, 日本生物工学会大会講演要旨集, Vol. 69th, 2017
  • 代謝シミュレーションに基づいた有用発酵微生物の育種, 徳山健斗,戸谷吉博,松田史生,清水浩, 日本生物工学会大会講演要旨集, Vol. 69th, 2017
  • 出芽酵母のメバロン酸経路強化遺伝子破壊の探索と評価, 神田義貴,戸谷吉博,松田史生,清水浩, 日本生物工学会大会講演要旨集, Vol. 69th, 2017
  • 枯草菌中枢代謝経路における酵素発現レベルとフラックス分布の関係, 戸谷吉博,富田淳美,松田史生,清水浩, 日本生物工学会大会講演要旨集, Vol. 69th, 2017
  • <sup>13</sup>C代謝フラックス解析による細胞の生理状態の理解と工学応用, 清水浩,松田史生,戸谷吉博,岡橋伸幸,前田昂亮, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), Vol. 49th, 2017
  • 光合成微生物の代謝モデルの開発と応用, 豊島正和,戸谷吉博,吉川勝徳,松田史生,清水浩, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), Vol. 49th, 2017
  • Synechocystis sp.PCC6803の中心代謝経路と光化学系の制御メカニズムの解析, 和田圭介,戸谷吉博,吉川勝徳,松田史生,清水浩, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), Vol. 49th, 2017
  • Application Studies Using Metabolomics, 及川彰,松田史生,三枝大輔, Journal of the Mass Spectrometry Society of Japan, Vol. 65, No. 5, 2017
  • Metabolic rewiring in Rb deficient cells during cancer progression, Susumu Kohno,Nobuyuki Okahashi,Shunsuke Kitajima,Sawako Suzuki,Tomoaki Tanaka,Fumio Matsuda,Hiroshi Shimizu,Chiaki Takahashi, CANCER RESEARCH, AMER ASSOC CANCER RESEARCH, Vol. 76, 2016/07
  • 細胞増殖定常期の制限基質による3-ヒドロキシプロピオン酸生産大腸菌への影響, 徳山健斗,戸谷吉博,松田史生,清水浩, 化学工学会年会研究発表講演要旨集(CD-ROM), Vol. 81st, 2016
  • 代謝フラックスを基盤とする物質生産法の開発, 清水浩,松田史生,戸谷吉博, 日本農芸化学会大会講演要旨集(Web), Vol. 2016, 2016
  • メバロン酸生産大腸菌の細胞内代謝状態の定量的な評価, 永井暉,戸谷吉博,松田史生,清水浩, 日本生物工学会大会講演要旨集, Vol. 68th, 2016
  • 大腸菌による効率的なメバロン酸生産のための代謝解析, 戸谷吉博,和田圭介,増田亜美,徳山健斗,坂野聡美,吉川勝徳,松田史生,清水浩, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), Vol. 48th, 2016
  • n-ブタノールを生産するSynechococcus elongatusの<sup>13</sup>C代謝フラックス解析, 和田圭介,戸谷吉博,松田史生,LIAO James C,清水浩, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), Vol. 48th, 2016
  • 蛍光タンパク質を利用した細胞内代謝状態の可視化と評価, 戸谷吉博,渡辺祥,後野直哉,増田亜美,徳山健斗,松田史生,清水浩, 化学工学会年会研究発表講演要旨集(CD-ROM), Vol. 81st, 2016
  • 解糖系フラックスセンサーを利用した高効率物質生産のための代謝制御手法の開発, 戸谷吉博,渡辺祥,徳山健斗,吉川勝徳,松田史生,清水浩, 日本農芸化学会大会講演要旨集(Web), Vol. 2016, 2016
  • RB不活性化に伴うメタボリックリワイヤリング機構の解明, 河野 晋,岡橋 伸幸,北嶋 俊輔,鈴木 佐和子,田中 知明,松田 史生,清水 浩,高橋 智聡, 日本生化学会大会・日本分子生物学会年会合同大会講演要旨集, (公社)日本生化学会, Vol. 88回・38回, p. [4T18L-09(3P1086)], 2015/12
  • 代謝デザインと<sup>13</sup>C同位体標識を用いた代謝フラックス解析の物質生産への応用, 清水浩,松田史生,戸谷吉博, 化学と生物, Japan Society for Bioscience, Biotechnology, and Agrochemistry, Vol. 53, No. 7, p. 455-461, 2015/06/20
  • 2P-119 Optimization of experimental design for metabolic flux analysis for Escherichia coli, Maeda Kousuke,Okahashi Nobuyuki,Matsuda Fumio,Shimizu Hiroshi, Vol. 67, p. 204-204, 2015
  • 3P-080 Engineering of co-factor balance for higher alcohol production in yeast, Nomura Yuta,Morita Keisuke,Matsuda Fumio,Shimizu Hiroshi, Vol. 67, p. 290-290, 2015
  • 3P-058 Trans-omics analysis of the central metabolism in Saccharomyces cerevisiae, Matsuda Fumio,Nishino Shunsuke,Shimizu Hiroshi, Vol. 67, p. 285-285, 2015
  • 3P-059 Analysis of S-adenosyl-L-methionine production mechanism by Saccharomyces cerevisiae, Hayakawa Kenshi,Matsuda Fumio,Shimizu Hiroshi, Vol. 67, p. 285-285, 2015
  • メバロン酸を生産する大腸菌の増殖期における<sup>13</sup>C代謝フラックス解析, 和田圭介,戸谷吉博,松田史生,清水浩, 日本生物工学会大会講演要旨集, Vol. 67th, 2015
  • 蛍光タンパク質を用いた代謝フラックスの可視化とその応用, 戸谷吉博,渡辺祥,後野直哉,増田亜美,徳山健斗,吉川勝徳,松田史生,清水浩, 日本生物工学会大会講演要旨集, Vol. 67th, 2015
  • 代謝システム解析に基づく酵母Saccharomyces cerevisiaeの中心代謝調節機構の解明, 西野駿佑,岡橋伸幸,富田淳美,松田史夫,清水浩, 日本農芸化学会大会講演要旨集(Web), Vol. 2015, 2015
  • 3P-042 Development of metabolic flux analysis for cultured animal cells using 13C enrichment of intracellular free metabolites, Okahashi Nobuyuki,Matsuda Fumio,Kohno Susumu,Takahashi Chiaki,Shimizu Hiroshi, Vol. 66, p. 205-205, 2014
  • 2P-104 Absolute quantification of central metabolic intermediates in yeast, Nishino Shunsuke,Okahashi Nobuyuki,Kinoshita Shouhei,Matsuda Fumio,Shimizu Hiroshi, Vol. 66, p. 132-132, 2014
  • 2P-105 Targeted proteome analysis of non-alcohol producing yeast strain, Matsuda Fumio,Ogura Tairo,Tomita Atsumi,Hirano Ichiro,Shimizu Hiroshi, Vol. 66, p. 133-133, 2014
  • 3S-Ca01 Practical metabolomics, Matsuda Fumio, Vol. 66, p. 180-180, 2014
  • 代謝シミュレーションやるなら今でしょ.(バイオミディア), 松田 史生, 生物工学会誌 : seibutsu-kogaku kaishi, 日本生物工学会, Vol. 92, No. 4, p. 190-190, 2014
  • フラックスバランス解析に基づく有用物質生産微生物の構築, 清水浩,吉川勝徳,古澤力,平沢敬,戸谷吉博,松田史生, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), Vol. 46th, 2014
  • 代謝シミュレーションによる細胞内代謝のデザインと工学的応用 (特集 産業微生物の力を深化させる日本の技~育種の最前線~我が国独自の起点・技術から), 松田 史生,吉川 勝徳,清水 浩, 生物工学会誌, 日本生物工学会, Vol. 92, No. 11, p. 593-597, 2014
  • バイオリファイナリー社会に向けた燃料・化学品生産, ISHII JUN,HASUNUMA TOMOHISA,MATSUDA FUMIO,KONDO AKIHIKO, 安全工学, Vol. 52, No. 4, p. 249-255, 2013/08
  • Current metabolomics : Practical applications, PUTRI Sastia P.,NAKAYAMA Yasumune,MATSUDA Fumio,UCHIKATA Takato,KOBAYASHI Shizu,MATSUBARA Atsuki,FUKUSAKI Eiichiro, Journal of bioscience and bioengineering, The Society for Biotechnology, Japan, Vol. 115, No. 6, p. 579-589, 2013/06/25
  • 革新的なものづくり実現のための「合成生物工学」, ISHII JUN,HASUNUMA TOMOHISA,MATSUDA FUMIO,KONDO AKIHIKO, 生物工学会誌, Vol. 91, No. 6, p. 314-318, 2013/06
  • 2P-123 Metabolic flux analysis of high isopropyl alcohol-producing Escherichia coli, Okahashi Nobuyuki,Yoshikawa Katsunori,Matsumoto Yoshiko,Shirai Tomokazu,Matsuda Fumio,Hirasawa Takashi,Furusawa Chikara,Wada Mitsufumi,Shimizu Hiroshi, Vol. 65, p. 135-135, 2013
  • 1P-150 Confidence interval evaluation of estimate accuracy on metabolic flux analysis of cyanobacteria, Nakajima Tsubasa,Kajihata Shuichi,Yoshikawa Katsunori,Matsuda Fumio,Hirasawa Takashi,Furusawa Chikara,Shimizu Hiroshi, Vol. 65, p. 55-55, 2013
  • 1P-155 Development of application software implemented determination of confidence interval for ^<13>C-based metabolic flux analysis, Kajihata Shuichi,Matsuda Fumio,Okahashi Nobuyuki,Furusawa Chikara,Shimizu Hiroshi, Vol. 65, p. 56-56, 2013
  • 1P-145 Activation of transhydrogenase-like shunt for isobutanol production in Saccharomyces cerevisiae, Ishii Jun,Matsuda Fumio,Kondo Takashi,Kondo Akihiko, Vol. 65, p. 54-54, 2013
  • メタボロミクスデータを用いた代謝フラックス解析, 清水浩,松田史生,平沢敬,吉川勝徳,戸谷吉博,小野直亮,古澤力,古澤力, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), Vol. 45th, 2013
  • 4Dp02 Production of cadaverine by Corynebacterium glutamicum, Okai Naoko,Niba Emma,Nakayama Hideki,Matsuda Fumio,Ogino Chiaki,Kondo Akihiko, Vol. 64, p. 205-205, 2012
  • A306 Metabolic profiling analysis of yeast central metabolism treated with metabolic inhibitors., Matsuda Fumio,Kondo Akihiko, Pesticide Science Society of Japan, No. 36, p. 96-96, 2011/02/25
  • バイオアナリシスの現状と未来(第63回大会シンポジウム・ワークショップ報告), 菊地 淳,馬場 健史,松田 史生, 生物工学会誌 : seibutsu-kogaku kaishi, 日本生物工学会, Vol. 89, No. 11, p. 673-673, 2011
  • 1Kp05 Design of yeast metabolism for producing next generation biofuels, Matsuda Fumio,Furusawa Chikara,Ishii Jun,Kondo Takashi,Shimizu Hiroshi,Kondo Akihiko, Vol. 63, p. 68-68, 2011
  • 1Kp08 Flux balance analysis (MFA) of xylose-fermenting Saccharomyces cerevisiae strains, Kato Hiroko,Nagata Kento,Yamada Ryosuke,Hasunuma Tomohisa,Matsuda Fumio,Kondo Akihiko, Vol. 63, p. 68-68, 2011
  • 1Kp10 Improvement of xylose fermenting recombinant Saccharomyces cerevisiae by controlling intracellular redox balances, Suga Hiroyuki,Hasunuma Tomohisa,Matsuda Fumio,Kondou Akihiko, Vol. 63, p. 69-69, 2011
  • 1Ap20 High density CO_2 fixation cycle by Euglena gracilis for biofuel production, Hayashi Masahiro,Matsuda Fumio,Hasunuma Tomohisa,Kondo Akihiko, Vol. 63, p. 25-25, 2011
  • 2S3a01 Metabolic profiling analysis for exploring metabolic systems, Matsuda Fumio, Vol. 63, p. 91-91, 2011
  • Integration of transcriptomics with metabolomics to uncover hormone- regulated metabolism in Arabidopsis, Sasaki Eriko,Suzuki Masashi,Muranaka Toshiya,Yamaguchi Shinjiro,Nakano Takeshi,Sakakibara Hitoshi,Nambara Eiji,Asami Tadao,Saito Kazuki,Shimada Yukihisa,Matsuda Fumio,Kusano Miyako,Okazaki Yozo,Oikawa Akira,Hirai Yokota Masami,Fukushima Atsushi,Hirayama Takashi,Yamamoto Kotaro, Plant and Cell Physiology Supplement, The Japanese Society of Plant Physiologists, Vol. 2010, p. 190-190, 2010
  • 3P-1139 Development of a comprehensive metabolic profiling technique for system biology analysis of microalgae, IZUMI Yoshihiro,AIKAWA Shimpei,MATSUDA Fumio,HASUNUMA Tomohisa,KONDO Akihiko, Vol. 22, p. 92-92, 2010
  • 3P-1134 Metabolic analysis of xylose fermentation in recombinant yeast, MATSUDA Fumio,KATO Hiroko,HASUNUMA Tomohisa,KONDO Akihiko, Vol. 22, p. 91-91, 2010
  • 2P-2062 Effect of light intensity on glycogen production and growth rate of cyanobacteria Spirulina (Arthrospira) platensis, AIKAWA Shimpei,IZUMI Yoshihiro,MATSUDA Fumio,HASUNUMA Tomohisa,KONDO Akihiko, Vol. 22, p. 122-122, 2010
  • 9C10 Distribution of Trp in transgenic rice seedlings expressing the feedback resistant anthranilate synthase α subunit gene OASA1D, Matsuda Fumio,Ishihara Atsushi,Takanashi Kojiro,Morino Keiko,Miyazawa Haruna,Wakasa Kyo,Miyagawa Hisashi, Pesticide Science Society of Japan, No. 34, p. 105-105, 2009/02/27
  • LCMSを用いた植物のリピドミクス解析系と脂質生合成新規遺伝子機能同定への応用, 岡咲洋三,下嶋美恵,澤田有司,澤田有司,豊岡公徳,成澤知子,持田恵一,田中宏憲,松田史生,平井晶子,平井晶子,平井優美,太田啓之,斉藤和季,斉藤和季, 日本植物生理学会年会要旨集, Vol. 50th, 2009
  • LC-MSを用いたシロイヌナズナugp3変異体の脂質プロファイル分析, 岡咲洋三,下嶋美恵,澤田有司,澤田有司,豊岡公徳,成澤知子,持田恵一,田中宏憲,松田史生,平井晶子,平井優美,平井優美,太田啓之,斉藤和季,斉藤和季, 日本植物細胞分子生物学会大会・シンポジウム講演要旨集, Vol. 27th, 2009
  • Function of serotonin production in defense responses of rice, ISHIHARA Atsushi,HASHIMOTO Yumi,TANAKA Chihiro,DUBOUZET Joseph G.,MATSUDA Fumio,NISHIOKA Takaaki,MIYAGAWA Hisashi,WAKASA Kyo, Pesticide Science Society of Japan, Vol. 33, p. 85-85, 2008/03/11
  • Functional estimation of rice OsAT1 gene based on the metabolic profiling analysis, MATSUDA Fumio,MORI Masaki,SAITO Kazuki, 日本農薬学会大会講演要旨集, 日本農薬学会, Vol. 33, p. 121-121, 2008/03/11
  • Induction of tryptophan metabolism by pathogen infection in rice, ISHIHARA Atsushi,HASHIMOTO Yumi,DUBOUZET Joseph G.,MATSUDA Fumio,NISHIOKA Takaaki,MIYAGAWA Hisashi,WAKASA Kyo, Pesticide Science Society of Japan, Vol. 32, p. 77-77, 2007/03/09
  • トリプトファン過剰生産型遺伝子組換えイネ植物体の代謝プロファイル分析, 松田史生,高梨功次郎,高梨功次郎,森野桂子,森野桂子,宮川恒,宮川恒,若狭暁,若狭暁, 日本植物生理学会年会要旨集, Vol. 47th, 2006
  • トリプトファン高生産形質転換ダイズの代謝プロファイリング, 高梨功次郎,松田史生,石本政男,石本政男,若狭暁,若狭暁,宮川恒,宮川恒, 日本農芸化学会大会講演要旨集, Vol. 2006, 2006
  • 7. Effects of tryptophan over-production on the level of indole-3-acetic acid in rice seedlings, Matsuda Fumio,Miyazawa Haruna,Wakasa kyo,Miyagawa Hisashi, The Japanese Society for Chemical Regulation of Plants, No. 40, p. 26-26, 2005/10/13
  • Metabolic flux analysis of the phenylpropanoid pathway in wound-healing potato tuber tissue using stable isotope-labeled tracer and LC-MS spectroscopy (vol 44, pg 510, 2003), F Matsuda,K Morino,M Miyashita,H Miyagawa, PLANT AND CELL PHYSIOLOGY, OXFORD UNIV PRESS, Vol. 44, No. 9, p. 961-961, 2003/09
  • Effect of elicitor treatment on secondary metabolites in potato tubers, MORINO Keiko,MIYAZAWA Haruna,MATSUDA Fumio,MIYAGAWA Hisashi, Pesticide Science Society of Japan, Vol. 28, p. 67-67, 2003/03/14
  • Induction of phenolic amide compounds in potate, YAMAGUCHI A.,MATSUDA F.,MIYAGAWA H.,UENO T., Pesticide Science Society of Japan, Vol. 26, p. 87-87, 2001/02/22
  • Induction of phenolic amide compounds in potato, MATSUDA F.,FUJIMORI A.,MIYAGAWA H.,UENO T., Pesticide Science Society of Japan, Vol. 25, p. 49-49, 2000/03/01
  • Induction of phenolic amide compouns in potato, MATSUDA F.,MIYAGAWA H.,UENO T.,FURUICHI N., Pesticide Science Society of Japan, Vol. 23, p. 75-75, 1998/03/01

Publications

  • 決定版質量分析活用スタンダード : 代謝物からタンパク質、食品・環境の分析まで質量分析のポテンシャルを活かしきる戦略とプロトコール, 馬場, 健史,松本, 雅記,松田, 史生,山本, 敦史, 羊土社, ISBN:9784758122641, 2023/08
  • 生命科学・生物工学のための間違いから学ぶ実践統計解析 : R・Pythonによるデータ処理事始め, 川瀬, 雅也,松田, 史生,日本生物工学会, 近代科学社Digital,近代科学社(発売), ISBN:9784764960305, 2021/12
  • メタボロミクス実践ガイド〜サンプル調製からデータ解析まで、あなたに合った実験デザインと達人テクニック (実験医学別冊), 馬場, 健史,平山, 明由,松田, 史生,津川, 裕司, 羊土社, ISBN:4758122512, 2021/04/01
  • 医薬品開発におけるオミクス解析技術, 松田史生, 情報機構, ISBN:9784865021844, 2020/03
  • スマートセルインダストリー : 微生物細胞を用いた物質生産の展望, 久原哲,松田史生, シーエムシー出版, ISBN:9784781313344, 2018/06
  • ビジュアルバイオテクノロジー, Dehlinger, Carolyn,福井, 希一,内山, 進,松田, 史生, 化学同人, ISBN:9784759819205, 2017/04

Industrial Property Rights

  • プラントアクティベーター, 浅見 忠男,彦坂 政志,森 昌樹,前田 哲,松田 史生,斉藤 和季, 特許第6061321号, 特願2012-036947, 出願日:2012/02/23, 登録日:2016/12/22
  • 発酵プロセス利用による有用物質の製造方法, 原 清敬,原 陽子,戸谷 吉博,松田 史生,鎌田 健太郎,田中 涼, WO2020-050113, JP2019033690, 出願日:2019/08/28
  • ロドプシンの新規変異体, 原 清敬,原(弘埜) 陽子,伊藤 創平,中野 祥吾,佐藤 良樹,川崎 真由,松田 史生,戸谷 吉博,清家 泰介,大塚 健介, 特願2022-162218, 出願日:2022/10/07
  • 文書検索支援装置, 金澤 慎司,清水 悟司,松田 史生, 特願2021-090190, 出願日:2021/05/28
  • 組み換え体及びスクアレンの製造方法, 浅野 真菜,久野 斉,永久保 雅夫,清水 浩,松田 史生,戸谷 吉博,神田 義貴, 特願2017-170236, 出願日:2017/09/05
  • 藻類及び藻類の製造方法, 戸谷 吉博,清水 浩,吉川 勝徳,松迫 卓也,松田 史生,永久保 雅夫, 特願2016-147580, 出願日:2016/07/27
  • イソブタノール生産酵母, 松田 史生,近藤 昭彦,石井 純, 特願2013-094568, 出願日:2013/04/26
  • 解析装置および解析方法, 松田史生,金澤慎司, 特願2019-089616, 出願日:2019/05/10

Works

  • ensemblemodeling, 2021/04/01 - Present
  • blankmaps, 2020/04 - Present
  • mfapy, 2019/04 - Present

Awards

  • 第30回生物工学論文賞, 日本生物工学会, 金澤慎司,野田 陽,伊東 有沙,橋本 恭子,國澤 研大,中西 豪,梶原 茂樹,向 紀雄,飯田 順子,福崎 英一郎,松田 史生, 2022/10
  • Poster award, 2nd International BMS Symposium 2018 in Kyoto, 2018/10
  • 第26回生物工学論文賞, 和田 圭介,戸谷 吉博,坂野 聡美,吉川 勝徳,松田 史生,清水 浩, 日本生物工学会, 2018/09
  • 奨励賞, 松田史生, 日本質量分析学会, 2018/05

Presentations

  • Trans omics analysis of metabolic rewiring in inhibitor treated cancer cells by integrating 13C metabolic flux and metabolome analyses, Fumio Matsuda, The 29th Hot Spring Harbor International Symposium Cutting Edge of Technical Innovations in Trans Omics, 2020/02/06
  • 出芽酵母中心代謝の計測と応用, 松田史生, 第116回醗酵学懇話会, 2020/01/31
  • Trans-omic analysis of the central metabolism of Saccharomyces cerevisiae by integration of metabolome, metabolic flux, and proteome data, Fumio Matsuda,Kazuki Yamazaki,Shunsuke Nishino,Hiroshi Shimizu, International Conference of Systemes Biology 2019, 2019/11/04
  • How to use targeted proteomics in synthetic and systems biology, Fumio Matsuda, 2019/10/27
  • 定量プロテオミクスで代謝を解析してみる, 松田史生, 第8回植物二次代謝フロンティア研究会, 2019/10/20
  • 乳がん細胞MCF-7の呼吸鎖阻害剤処理に対する代謝アダプテーションの解析, 岡橋伸幸,辻周真,小倉泰郎,飯田順子,松田史生, 第13回メタボロームシンポジウム, 2019/10/17
  • 13C-代謝フラックス解析を用いた薬剤耐性代謝アダプテーション機構の解析, 松田史生, 第92回日本生化学会大会, 2019/09/20
  • データ駆動型代謝数理モデル構築とシアノバクテリア代謝工学への応用, 松田史生, 第71回日本生物工学会大会, 2019/09/16
  • デルタロドプシン発現が出芽酵母の代謝に及ぼす影響, 大塚健介,弘埜陽子,石井寛子,石井純,岡橋伸幸,戸谷吉博,原清敬,松田史生, 2019/09
  • 大腸菌によるメバロン酸高生産のための流加培養条件の評価, 前田健仁,戸谷吉博,松田史生,清水浩, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), 2018/09/18
  • 増殖連動型物質生産のin silico解析における反応律速点の同定法の開発と実験検証, 清水浩,徳山健斗,戸谷吉博,松田史生, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), 2018/09/18
  • 動的代謝モデルアンサンブルを用いたエタノール生産シアノバクテリアの代謝工学, 西口大貴,永井暉,松田史生,清水浩, 日本生物工学会大会講演要旨集, 2018/08/07
  • 様々な波長の光照射下におけるシアノバクテリアの解析, 豊島正和,阪田真澄,戸谷吉博,松田史生,清水浩, 日本生物工学会大会講演要旨集, 2018/08/07
  • 出芽酵母2,3‐ブタンジオール生産に向けた不活性型Cas9によるエタノール生合成経路の抑制, 森田啓介,松田史生,石井純,近藤昭彦,清水浩, 日本生物工学会大会講演要旨集, 2018/08/07
  • 代謝工学による光合成の統合解析と工学応用, 豊島正和,戸谷吉博,松田史生,清水浩, 日本生物工学会大会講演要旨集, 2018/08/07
  • ロドプシンを利用した大腸菌における光駆動ATP再生, 鎌田健太郎,戸谷吉博,弘埜陽子,原清敬,松田史生,清水浩, 日本生物工学会大会講演要旨集, 2018/08/07
  • 安定同位体非定常の<sup>13</sup>C代謝フラックス解析およびプロテオーム解析によるn‐ブタノールを生産するSynechococcus elongatus PCC7942の代謝状態の推定, 和田圭介,植林希代加,戸谷吉博,傳寶雄大,PUTRI Sastia,松田史生,福崎英一郎,LIAO James C,清水浩, 化学工学会年会研究発表講演要旨集(CD-ROM), 2018/03/13
  • ミトコンドリア代謝の抑制による出芽酵母2,3‐ブタンジオール生産能力の向上, 森田啓介,松田史生,岡本浩二,石井純,近藤昭彦,清水浩, 日本農芸化学会大会講演要旨集(Web), 2018/03/05
  • FBAを用いた出芽酵母のメバロン酸経路強化遺伝子破壊の探索と評価, 神田義貴,戸谷吉博,松田史生,清水浩, 日本農芸化学会大会講演要旨集(Web), 2018/03/05
  • Synechocystis sp.PCC6803の中心代謝経路と光化学系の制御メカニズムの解析, 和田圭介,戸谷吉博,吉川勝徳,松田史生,清水浩, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), 2017/09/20
  • 光合成微生物の代謝モデルの開発と応用, 豊島正和,戸谷吉博,吉川勝徳,松田史生,清水浩, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), 2017/09/20
  • <sup>13</sup>C代謝フラックス解析による細胞の生理状態の理解と工学応用, 清水浩,松田史生,戸谷吉博,岡橋伸幸,前田昂亮, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), 2017/09/20
  • シアノバクテリアSynechocystis sp.PCC6803の光化学反応を精緻化したゲノムスケールモデルを用いた様々な光条件における代謝シミュレーション, 豊島正和,戸谷吉博,松田史生,清水浩, 日本生物工学会大会講演要旨集, 2017/08/08
  • 出芽酵母中心代謝酵素欠損株のトランスオミクス解析, 松田史生,西野駿佑,清水浩, 日本生物工学会大会講演要旨集, 2017/08/08
  • ピルビン酸代謝フローの転換による出芽酵母2,3‐ブタンジオール生産性の向上, 森田啓介,松田史生,岡本浩二,石井純,近藤昭彦,清水浩, 日本生物工学会大会講演要旨集, 2017/08/08
  • <sup>13</sup>C代謝フラックス解析およびプロテオーム解析を用いたn‐ブタノール生産シアノバクテリア株の代謝解析, 和田圭介,植林希代加,戸谷吉博,傳寶雄大,PUTRI Sastia,松田史生,福崎英一郎,LIAO James,清水浩, 日本生物工学会大会講演要旨集, 2017/08/08
  • 代謝シミュレーションに基づいた有用発酵微生物の育種, 徳山健斗,戸谷吉博,松田史生,清水浩, 日本生物工学会大会講演要旨集, 2017/08/08
  • 枯草菌中枢代謝経路における酵素発現レベルとフラックス分布の関係, 戸谷吉博,富田淳美,松田史生,清水浩, 日本生物工学会大会講演要旨集, 2017/08/08
  • 出芽酵母のメバロン酸経路強化遺伝子破壊の探索と評価, 神田義貴,戸谷吉博,松田史生,清水浩, 日本生物工学会大会講演要旨集, 2017/08/08
  • Garuda platformを用いた質量分析トランスオミクスデータの自動可視化, 山田洋平,松田史生,GHOSH Samik,長谷武志,木下翔平,西野駿佑,富田淳美,TSORMAN Nikolaos,遠山敦彦,梶原茂樹,向紀雄,松岡由希子,清水浩,福崎英一郎,北野宏明,飯田順子,飯田順子, 質量分析総合討論会講演要旨集, 2017/05/01
  • QconCAT法を用いたシアノバクテリア光化学装置の定量プロテオミクス, 徳丸雄磨,植林希代加,徳山健斗,和田圭介,松田史生,清水浩, 質量分析総合討論会講演要旨集, 2017/05/01
  • 出芽酵母のメバロン酸経路の強化に有効な遺伝子破壊の探索, 神田義貴,戸谷吉博,松田史生,清水浩, 化学工学会年会研究発表講演要旨集(CD-ROM), 2017/03/06
  • マイトファジー抑制による出芽酵母の細胞質物質生産能力向上, 森田啓介,松田史生,岡本浩二,石井純,近藤昭彦,清水浩, 日本農芸化学会大会講演要旨集(Web), 2017/03/05
  • n‐ブタノールを生産するSynechococcus elongatusの<sup>13</sup>C代謝フラックス解析, 和田圭介,戸谷吉博,松田史生,LIAO James C,清水浩, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), 2016/09/06
  • 大腸菌による効率的なメバロン酸生産のための代謝解析, 戸谷吉博,和田圭介,増田亜美,徳山健斗,坂野聡美,吉川勝徳,松田史生,清水浩, 化学工学会秋季大会研究発表講演要旨集(CD-ROM), 2016/09/06
  • イソブタノール生産酵母の構築:オルガネラ局在の検討, 森田啓介,松田史生,伊田賢吾,石井純,近藤昭彦,清水浩, 日本生物工学会大会講演要旨集, 2016/08/25
  • メバロン酸生産大腸菌の細胞内代謝状態の定量的な評価, 永井暉,戸谷吉博,松田史生,清水浩, 日本生物工学会大会講演要旨集, 2016/08/25
  • 質量分析装置を用いた酵母中心代謝のトランスオミクス解析, 松田史生,西野駿佑,清水浩, 質量分析総合討論会講演要旨集, 2016/05/09
  • 蛍光タンパク質を利用した細胞内代謝状態の可視化と評価, 戸谷吉博,渡辺祥,後野直哉,増田亜美,徳山健斗,松田史生,清水浩, 化学工学会年会研究発表講演要旨集(CD-ROM), 2016/03/13
  • 細胞増殖定常期の制限基質による3‐ヒドロキシプロピオン酸生産大腸菌への影響, 徳山健斗,戸谷吉博,松田史生,清水浩, 化学工学会年会研究発表講演要旨集(CD-ROM), 2016/03/13
  • 2,3‐ブタンジオール高生産出芽酵母株の構築, 松田史生,伊田賢吾,木下翔平,森田啓介,石井寛子,富田淳美,石井純,近藤昭彦,清水浩, 日本農芸化学会大会講演要旨集(Web), 2016/03/05
  • 異種遺伝子発現による出芽酵母イソブタノール合成活性化, 森田啓介,松田史生,石井純,近藤昭彦,清水浩, 日本農芸化学会大会講演要旨集(Web), 2016/03/05
  • 解糖系フラックスセンサーを利用した高効率物質生産のための代謝制御手法の開発, 戸谷吉博,渡辺祥,徳山健斗,吉川勝徳,松田史生,清水浩, 日本農芸化学会大会講演要旨集(Web), 2016/03/05
  • 代謝フラックスを基盤とする物質生産法の開発, 清水浩,松田史生,戸谷吉博, 日本農芸化学会大会講演要旨集(Web), 2016/03/05
  • Saccharomyces cerevisiaeのS‐adenosyl‐L‐methionine生産機構の解析, 早川謙嗣,早川謙嗣,松田史生,清水浩, 日本生物工学会大会講演要旨集, 2015/09/25
  • 蛍光タンパク質を用いた代謝フラックスの可視化とその応用, 戸谷吉博,渡辺祥,後野直哉,増田亜美,徳山健斗,吉川勝徳,松田史生,清水浩, 日本生物工学会大会講演要旨集, 2015/09/25
  • 次世代バイオアルコール生産酵母の代謝デザイン, 松田史生,古澤力,石井純,近藤貴志,清水浩,近藤昭彦, 日本生物工学会大会講演要旨集, 2011/08/25
  • Function of flavoniod biosynthetic pathway for abiotic stress mitigation in Arabidopsis, Nakabayashi Ryo,Yonekura-Sakakibara Keiko,Urano Kaoru,Matsuda Fumio,Kojima Mikiko,Sakakibara Hitoshi,Shinozaki Kazuo,Tohge Takayuki,Yamazaki Mami,Saito Kazuki, Plant and Cell Physiology Supplement, 2011
  • ReSpect: MS/MS database and data resource for phytochemicals, Sawada Yuji,Nakabayashi Ryo,Yamada Yutaka,Suzuki Makoto,Akiyama Kenji,Sakurai Tetsuya,Matsuda Fumio,Yokota Hirai Masami,Saito Kazuki, Plant and Cell Physiology Supplement, 2011
  • Integrated analysis of metabolite and transcript profiling data reveals comprehensive reprogramming of metabolic regulatory networks in Arabidopsis to ultraviolet-B light, Kusano Miyako,Tohge Takayuki,Fukushima Atsushi,Kobayashi Makoto,Hayashi Naomi,Otsuki Hitomi,Kondou Youichi,Goto Hiroto,Kawashima Mika,Matsuda Fumio,Niida Rie,Matsui Minami,Saito Kazuki,Fernie Alisdair, Plant and Cell Physiology Supplement, 2011
  • Integration of transcriptomics with metabolomics to uncover hormone- regulated metabolism in Arabidopsis, Sasaki Eriko,Matsuda Fumio,Kusano Miyako,Okazaki Yozo,Oikawa Akira,Hirai Yokota Masami,Fukushima Atsushi,Hirayama Takashi,Yamamoto Kotaro,Suzuki Masashi,Muranaka Toshiya,Yamaguchi Shinjiro,Nakano Takeshi,Sakakibara Hitoshi,Nambara Eiji,Asami Tadao,Saito Kazuki,Shimada Yukihisa, Plant and Cell Physiology Supplement, 2010
  • Substantial equivalence of genetic modified tomato by MS-based metabolomics, Kusano Miyako,Redestig Henning,Oikawa Akira,Matsuda Fumio,Fukushima Atsushi,Hirai Tadayoshi,Hiwasa-Tanase Kyoko,Watanabe Shin,Yano Megumu,Arita Masanori,Ezura Hiroshi,Saito Kazuki, Plant and Cell Physiology Supplement, 2010
  • The effect of double over-expressions of two MYB genes on gene expression and flavonoid accumulation in Arabidopsis, Nakabayashi Ryo,Yonekura-Sakakibara Keiko,Matsuda Fumio,Tohge Takayuki,Kitajima Mariko,Takayama Hiromitsu,Yamazaki Mami,Saito Kazuki, Plant and Cell Physiology Supplement, 2010
  • Functional analysis of an acyltransferase family gene which is regulated by MS1 transcription factor, Ito Takuya,Matsuda Fumio,Tohge Takayuki,Osada Hiroyuki,Saito Kazuki,Shinozaki Kazuo, Plant and Cell Physiology Supplement, 2009
  • Metabolic profiling of flavonoid mutants in immature seeds of Arabidopsis, Kitamura Satoshi,Tohge Takayuki,Matsuda Fumio,Yonekura-Sakakibara Keiko,Saito Kazuki,Narumi Issay, Plant and Cell Physiology Supplement, 2009
  • Functional Identification of a Novel Anthocyanin Glycosyltransferase Gene in <I>Arabidopsis</I>, Yonekura-Sakakibara Keiko,Inoue Eri,Matsuda Fumio,Wangwattana Bunyapa,Yamazaki Mami,Saito Kazuki, Plant and Cell Physiology Supplement, 2009
  • Construction of AtMetExpress Development LC/MS database, Matsuda Fumio,Akiyama Kenji,Sasaki Eriko,Shimada Yukihisa,Sakurai Tetsuya,Saito Kazuki, Plant and Cell Physiology Supplement, 2009
  • Plant lipidomics based on liquid chromatography mass spectrometry and its application for functional genomics, Okazaki Yozo,Shimojima Mie,Sawada Yuji,Toyooka Kiminori,Narisawa Tomoko,Mochida Keiichi,Tanaka Hironori,Matsuda Fumio,Hirai Akiko,Hirai Masami Yokota,Ohta Hiroyuki,Saito Kazuki, Plant and Cell Physiology Supplement, 2009
  • A Single Cell, a Single Vacuole Metabolomics, Oikawa Akira,Matsuda Fumio,Mimura Tetsuro,Saito Kazuki, Plant and Cell Physiology Supplement, 2009
  • Functional estimation of rice OsAT1 gene based on the metabolic profiling analysis, MATSUDA Fumio,MORI Masaki,SAITO Kazuki, 日本農薬学会大会講演要旨集, 2008/03/11
  • QTL Analysis of Amino Acid Contents in Rice Seeds., Matsuda Fumio,Oikawa Akira,Sawada Yuji,Hirai Masami,Yano Masahiro,Saito Kazuki, Plant and Cell Physiology Supplement, 2008

Social Activities

  • Pythonデータ解析入門, 日本生物工学会バイオ計測サイエンス研究部会, バイオ計測サイエンス研究部会第4回企画, 2019/09/23 -

Committee Memberships

  • Mass Spectrometry編集委員, 2022/04 - Present
  • 日本質量分析学会, 和文誌編集委員, 2020/04 - Present
  • 日本生物工学会, 和文誌編集員, 2019/04 - Present
  • 日本質量分析学会理事, 2023/04 - 2025/03
  • 日本質量分析学会, 第71回質量分析総合討論会2023実行委員長, 2023/05 - 2023/05
  • 第15回メタボロームシンポジウム実行委員, 第15回メタボロームシンポジウム実行委員, 2021/05 - 2021/11
  • 日本質量分析学会, 理事, 2017/04 - 2021/03
  • 日本質量分析学会, 日本質量分析総合討論会2020実行委員, 2020/05 - 2020/05
  • 日本生物工学会, 英文誌編集員, - 2016/03