Calredoxin represents a novel type of calcium-dependent sensor-responder connected to redox regulation in the chloroplast

Ana Karina Hochmal, Karen Zinzius, Ratana Charoenwattanasatien, Philipp Gaebelein, Risa Mutoh, Hideaki Tanaka, Stefan Schulze, Gai Liu, Martin Scholz, Andre Nordhues, Jan Niklas Offenborn, Dimitris Petroutsos, Giovanni Finazzi, Christian Fufezan, Kaiyao Huang, Genji Kurisu, Michael Hippler

NATURE COMMUNICATIONS　Vol. 7　2016/06　Research paper (scientific journal)

Structures of cyanobacteriochromes from phototaxis regulators AnPixJ and TePixJ reveal general and specific photoconversion mechanism.

Rei Narikawa, Takami Ishizuka, Norifumi Muraki, Tomoo Shiba, Genji Kurisu, Masahiko Ikeuchi

Proceedings of the National Academy of Sciences of the United States of America　Vol. 110　No. 3　p. 918-23　2013/01/15　Research paper (scientific journal)

The 2.8 Å crystal structure of the dynein motor domain

Takahide Kon, Takuji Oyama, Rieko Shimo-Kon, Kenji Imamula, Tomohiro Shima, Kazuo Sutoh, Genji Kurisu

Nature　Vol. 484　No. 7394　p. 345-350　2012/04　Research paper (scientific journal)

X-ray structure of a functional full-length dynein motor domain

Kon, T., Sutoh, K., Kurisu, G.

Nature Structural and Molecular Biology　Vol. 18　No. 6　p. 638-642　2011/06　Research paper (scientific journal)

X-ray crystal structure of the light-independent protochlorophyllide reductase.

Norifumi Muraki, Jiro Nomata, Kozue Ebata, Tadashi Mizoguchi, Tomoo Shiba, Hitoshi Tamiaki, Genji Kurisu, Yuichi Fujita

Nature　Vol. 465　No. 7294　p. 110-4　2010/05/06　Research paper (scientific journal)

The structure of BtuB with bound colicin E3 R-domain implies a translocon

Kurisu, G., Zakharov, S.D., Zhalnina, M.V., Bano, S., Eroukova, V.Y., Rokitskaya, T.I., Antonenko, Y.N., Wiener, M.C., Cramer, W.A.

Nature Structural Biology　Vol. 10　No. 11　p. 948-954　2003/11　Research paper (scientific journal)

Structure of the cytochrome b(6)f complex of oxygenic photosynthesis: Tuning the cavity

G Kurisu, HM Zhang, JL Smith, WA Cramer

SCIENCE　Vol. 302　No. 5647　p. 1009-1014　2003/11　Research paper (scientific journal)

A defined protein-detergent-lipid complex for crystallization of integral membrane proteins: The cytochrome b6f complex of oxygenic photosynthesis

Zhang, H., Kurisu, G., Smith, J.L., Cramer, W.A.

Proceedings of the National Academy of Sciences of the United States of America　Vol. 100　No. 9　2003　Research paper (scientific journal)

Structure of the electron transfer complex between ferredoxin and ferredoxin-NAPD⁺reductase

Kurisu, G., Kusunoki, M., Katoh, E., Yamazaki, T., Teshima, K., Onda, Y., Kimata-Ariga, Y., Hase, T.

Nature Structural Biology　Vol. 8　No. 2　p. 117-121　2001/02/01　Research paper (scientific journal)

Monovalent Cation Dependent Oligomerization and DNA Binding of MoyR: a GntR family monooxygenase regulator in Mycobacterium tuberculosis

Thanusha Abeywickrama, Tanaka Hideaki, Genji Kurisu, Inoka Perera

2025/08/24

Protein Data Bank Japan: Computational Resources for Analysis of Protein Structures

Gert-Jan Bekker, Chioko Nagao, Matsuyuki Shirota, Tsukasa Nakamura, Toshiaki Katayama, Daisuke Kihara, Kengo Kinoshita, Genji Kurisu

Journal of Molecular Biology　Vol. 437　No. 15　2025/08　Research paper (scientific journal)

Reduction‐Induced Structural and Motional Changes of Plant‐Type Ferredoxin Using Molecular Dynamics and Umbrella Sampling Simulations

Tomoki Nakayoshi, Yusuke Ohnishi, Hideaki Tanaka, Genji Kurisu, Yu Takano

Journal of Computational Chemistry　2025/07/30　Research paper (scientific journal)

Understanding PebS–Ferredoxin Recognition: A Structural Perspective on Viral and Host Redox Partners

Fjoralba Zeqiri, Thomas Schmidt, Yuko Misumi, Yohei Miyanoiri, Nicole Frankenberg-Dinkel, Genji Kurisu, Eckhard Hofmann

2025/07/26

A planar dimer of bovine ATP synthase

Chimari Jiko, Atsuki Nakano, Yosuke Teshirogi, Eiki Yamashita, Genji Kurisu, Daron M Standley, Tohru Terada, Kaoru Mitsuoka, Ken Yokoyama, Christoph Gerle

2025/07/24

Application of multiple small-wedge synchrotron crystallography for post-reaction structural characterization of a stimuli-responsive small-molecule crystal

Toshiyuki Sasaki, Takanori Nakane, Kazuyoshi Takimoto, Kouhei Ichiyanagi, Yuki Mori, Seiki Baba, Naoki Sakai, Genji Kurisu, Mikiji Miyata, Takahiro Uno, Takahito Itoh

Bulletin of the Chemical Society of Japan　Vol. 98　No. 7　2025/07/03　Research paper (scientific journal)

Unique structural features define the decarboxylation activity of a CYP152 fatty acid decarboxylase from Lacicoccus alkaliphilus

Suppalak Phaisan, Aisaraphon Phintha, Duangthip Trisrivirat, Narin Lawan, Jeerus Sucharitakul, Ailada Charoenpol, Pratchaya Watthaisong, Hideaki Tanaka, Genji Kurisu, Pimchai Chaiyen

Journal of Biological Chemistry　2025/07　Research paper (scientific journal)

NMR-Based Rational Drug Design of G:G Mismatch DNA Binding Ligand Trapping Transient Complex via Disruption of a Key Allosteric Interaction

Shuhei Sakurabayashi, Kyoko Furuita, Takeshi Yamada, Noriaki Sugiura, Makoto Nomura, Takanori Nakane, Akihiro Kawamoto, Genji Kurisu, Yohei Miyanoiri, Toshimichi Fujiwara, Kazuhiko Nakatani, Chojiro Kojima

Journal of the American Chemical Society　Vol. 147　No. 17　p. 14254-14269　2025/04/17　Research paper (scientific journal)

The thylakoid membrane remodeling protein VIPP1 forms bundled oligomers in tobacco chloroplasts.

Sarah W Gachie, Alexandre Muhire, Di Li, Akihiro Kawamoto, Noriko Takeda-Kamiya, Yumi Goto, Mayuko Sato, Kiminori Toyooka, Ryo Yoshimura, Tsuneaki Takami, Lingang Zhang, Genji Kurisu, Toru Terachi, Wataru Sakamoto

Plant physiology　Vol. 198　No. 1　2025/04/08　Research paper (scientific journal)

Protein Data Bank Japan: Improved tools for sequence‐oriented analysis of protein structures

Gert‐Jan Bekker, Chioko Nagao, Matsuyuki Shirota, Tsukasa Nakamura, Toshiaki Katayama, Daisuke Kihara, Kengo Kinoshita, Genji Kurisu

Protein Science　Vol. 34　No. 3　2025/03　Research paper (scientific journal)

Redox-dependent hydrogen-bond network rearrangement of ferredoxin–NADP+ reductase revealed by high-resolution X-ray and neutron crystallography

Midori Uenaka, Yusuke Ohnishi, Akane Ise, Jiang Yu, Naomine Yano, Katsuhiro Kusaka, Hideaki Tanaka, Genji Kurisu

Acta Crystallographica Section F Structural Biology Communications　Vol. 81　No. 3　p. 73-84　2025/03/01　Research paper (scientific journal)

Structural determinants of oxygen resistance and Zn 2+ -mediated stability of the [FeFe]-hydrogenase from Clostridium beijerinckii

Jifu Duan, Andreas Rutz, Akihiro Kawamoto, Shuvankar Naskar, Kristina Edenharter, Silke Leimkühler, Eckhard Hofmann, Thomas Happe, Genji Kurisu

Proceedings of the National Academy of Sciences　2025/01/21　Research paper (scientific journal)

Tuning of a Hydrogen‐Bonded Organic Framework by Liquid‐Assisted Mechanosynthesis between Trans‐Aconitic Acid and Isonicotinamide

Diptajyoti Gogoi, Toshiyuki Sasaki, Nabadeep Kalita, Tapaswini Sethi, Kouhei Ichiyanagi, Takanori Nakane, Akihiro Kawamoto, Dinabandhu Das, Genji Kurisu, Ranjit Thakuria

Chemistry – A European Journal　2025/01/17　Research paper (scientific journal)

Diatom pyrenoids are encased in a protein shell that enables efficient CO2 fixation

Ginga Shimakawa, Manon Demulder, Serena Flori, Akihiro Kawamoto, Yoshinori Tsuji, Hermanus Nawaly, Atsuko Tanaka, Rei Tohda, Tadayoshi Ota, Hiroaki Matsui, Natsumi Morishima, Ryosuke Okubo, Wojciech Wietrzynski, Lorenz Lamm, Ricardo D. Righetto, Clarisse Uwizeye, Benoit Gallet, Pierre-Henri Jouneau, Christoph Gerle, Genji Kurisu, Giovanni Finazzi, Benjamin D. Engel, Yusuke Matsuda

Cell　2024/10　Research paper (scientific journal)

Structure-based validation of recombinant light-harvesting complex II

Soichiro Seki, Tomoko Miyata, Naoko Norioka, Hideaki Tanaka, Genji Kurisu, Keiichi Namba, Ritsuko Fujii

PNAS Nexus　Vol. 3　No. 9　2024/09/02　Research paper (scientific journal)

IHMCIF: An Extension of the PDBx/mmCIF Data Standard for Integrative Structure Determination Methods.

Brinda Vallat, Benjamin M Webb, John D Westbrook, Thomas D Goddard, Christian A Hanke, Andrea Graziadei, Ezra Peisach, Arthur Zalevsky, Jared Sagendorf, Hongsuda Tangmunarunkit, Serban Voinea, Monica Sekharan, Jian Yu, Alexander A M J J Bonvin, Frank DiMaio, Gerhard Hummer, Jens Meiler, Emad Tajkhorshid, Thomas E Ferrin, Catherine L Lawson, Alexander Leitner, Juri Rappsilber, Claus A M Seidel, Cy M Jeffries, Stephen K Burley, Jeffrey C Hoch, Genji Kurisu, Kyle Morris, Ardan Patwardhan, Sameer Velankar, Torsten Schwede, Jill Trewhella, Carl Kesselman, Helen M Berman, Andrej Sali

Journal of molecular biology　Vol. 436　No. 17　p. 168546-168546　2024/09/01　Research paper (scientific journal)

Analysis of Solid-State Emission of the p-Bis(2,2-dicyanovinyl)benzene Analogue through Combined X-ray, Synchrotron, and Microcrystal Electron Diffraction

Poonam Deka, Shilpi Jaiswal, Parishmita Sarma, Debajit Bora, Takanori Nakane, Akihiro Kawamoto, Yusuke Ohnishi, Genji Kurisu, Sanjeev Pran Mahanta, Khaled Althubeiti, Kouhei Ichiyanagi, Toshiyuki Sasaki, Ranjit Thakuria

Crystal Growth & Design　2024/08/23　Research paper (scientific journal)

Crystal structure of pectocin M1 reveals diverse conformations and interactions during its initial step via the ferredoxin uptake system.

Nawee Jantarit, Hideaki Tanaka, Yuxi Lin, Young-Ho Lee, Genji Kurisu

FEBS open bio　2024/08/09　Research paper (scientific journal)

NDT‐C11 as a viable novel detergent for single particle cryo‐EM

Chimari Jiko, Jiannan Li, Youngsun Moon, Yoshito Tanaka, Chai C. Gopalasingam, Hideki Shigematsu, Pil Seok Chae, Genji Kurisu, Christoph Gerle

ChemPlusChem　2024/06/17　Research paper (scientific journal)

Versatile Biaryls and Fused Aromatics through Oxidative Coupling of Hydroquinones with (Hetero)Arenes

Takaaki Aijima, Rina Ueda, Takanori Nakane, Fumiaki Makino, Yusuke Ohnishi, Jin Tokunaga, Keiichiro Nakajima, Shinichiro Kamino, Genji Kurisu, Keiichi Namba, Hiroki Nakata, Kaiki Mogi, Hironao Sajiki, Shuji Akai, Yoshinari Sawama

ChemistrySelect　Vol. 9　No. 15　2024/04/15　Research paper (scientific journal)

Community recommendations on cryoEM data archiving and validation.

Gerard J Kleywegt, Paul D Adams, Sarah J Butcher, Catherine L Lawson, Alexis Rohou, Peter B Rosenthal, Sriram Subramaniam, Maya Topf, Sanja Abbott, Philip R Baldwin, John M Berrisford, Gérard Bricogne, Preeti Choudhary, Tristan I Croll, Radostin Danev, Sai J Ganesan, Timothy Grant, Aleksandras Gutmanas, Richard Henderson, J Bernard Heymann, Juha T Huiskonen, Andrei Istrate, Takayuki Kato, Gabriel C Lander, Shee Mei Lok, Steven J Ludtke, Garib N Murshudov, Ryan Pye, Grigore D Pintilie, Jane S Richardson, Carsten Sachse, Osman Salih, Sjors H W Scheres, Gunnar F Schroeder, Carlos Oscar S Sorzano, Scott M Stagg, Zhe Wang, Rangana Warshamanage, John D Westbrook, Martyn D Winn, Jasmine Y Young, Stephen K Burley, Jeffrey C Hoch, Genji Kurisu, Kyle Morris, Ardan Patwardhan, Sameer Velankar

IUCrJ　Vol. 11　No. Pt 2　p. 140-151　2024/03/01　Research paper (scientific journal)

Mechanically-sensitive fluorochromism by molecular domino transformation in a Schiff base crystal

Toshiyuki Sasaki, Takanori Nakane, Akihiro Kawamoto, Yakai Zhao, Yushi Fujimoto, Tomohiro Nishizawa, Nabadeep Kalita, Seiji Tsuzuki, Fuyuki Ito, Upadrasta Ramamurty, Ranjit Thakuria, Genji Kurisu

Journal of Materials Chemistry C　2024/01　Research paper (scientific journal)

Announcing the launch of Protein Data Bank China as an Associate Member of the Worldwide Protein Data Bank Partnership

Wenqing Xu, Sameer Velankar, Ardan Patwardhan, Jeffrey C. Hoch, Stephen K. Burley, Genji Kurisu

Acta Crystallographica Section D Structural Biology　Vol. 79　No. 9　p. 792-795　2023/08/10　Research paper (scientific journal)

Crystal structure of the stalk region of axonemal inner‐arm dynein‐d reveals unique features in the coiled‐coil and microtubule‐binding domain

Seolmin Ko, Akiyuki Toda, Hideaki Tanaka, Jian Yu, Genji Kurisu

FEBS Letters　Vol. 597　No. 17　p. 2149-2160　2023/07/03　Research paper (scientific journal)

Structure Elucidation of Olanzapine Molecular Salts by Combining Mechanochemistry and Micro-Electron Diffraction

Diptajyoti Gogoi, Toshiyuki Sasaki, Takanori Nakane, Akihiro Kawamoto, Hironobu Hojo, Genji Kurisu, Ranjit Thakuria

Crystal Growth & Design　Vol. 23　No. 8　p. 5821-5826　2023/06/27　Research paper (scientific journal)

Three structures of PSI-LHCI from Chlamydomonas reinhardtii suggest a resting state re-activated by ferredoxin.

Christoph Gerle, Yuko Misumi, Akihiro Kawamoto, Hideaki Tanaka, Hisako Kawai-Kubota, Ryutaro Tokutsu, Eunchul Kim, Dror Chorev, Kazuhiro Abe, Carol V Robinson, Kaoru Mitsuoka, Jun Minagawa, Genji Kurisu

Biochimica et biophysica acta. Bioenergetics　p. 148986-148986　2023/06/01　Research paper (scientific journal)

Soluble domains of cytochrome c-556 and Rieske iron–sulfur protein from Chlorobaculum tepidum: Crystal structures and interaction analysis

Hiraku Kishimoto, Chihiro Azai, Tomoya Yamamoto, Risa Mutoh, Tetsuko Nakaniwa, Hideaki Tanaka, Yohei Miyanoiri, Genji Kurisu, Hirozo Oh-oka

Current Research in Structural Biology　p. 100101-100101　2023/04　Research paper (scientific journal)

Regulation of motor activity of ciliary outer-arm dynein by the light chain 1; Implications from the structure of the light chain bound to the microtubule-binding domain of the heavy chain

Toshiki Yagi, Akiyuki Toda, Muneyoshi Ichikawa, Genji Kurisu

Biophysics and Physicobiology　Vol. 20　No. 1　p. n/a-n/a　2023　Research paper (scientific journal)

Microcrystal electron diffraction (MicroED) structure determination of a mechanochemically synthesized co-crystal not affordable from solution crystallization

Toshiyuki Sasaki, Takanori Nakane, Akihiro Kawamoto, Tomohiro Nishizawa, Genji Kurisu

CrystEngComm　2023　Research paper (scientific journal)

Effects of Active-Center Reduction of Plant-Type Ferredoxin on Its Structure and Dynamics: Computational Analysis Using Molecular Dynamics Simulations

Tomoki Nakayoshi, Yusuke Ohnishi, Hideaki Tanaka, Genji Kurisu, Hiroko X. Kondo, Yu Takano

International Journal o f Molecular Sciences　Vol. 23　No. 24　p. 15913-15913　2022/12/14　Research paper (scientific journal)

History of Protein Data Bank Japan: standing at the beginning of the age of structural genomics

Genji Kurisu, Gert-Jan Bekker, Atsushi Nakagawa

Biophysical Reviews　2022/12/09　Research paper (scientific journal)

Biological Magnetic Resonance Data Bank

Jeffrey C Hoch, Kumaran Baskaran, Harrison Burr, John Chin, Hamid R Eghbalnia, Toshimichi Fujiwara, Michael R Gryk, Takeshi Iwata, Chojiro Kojima, Genji Kurisu, Dmitri Maziuk, Yohei Miyanoiri, Jonathan R Wedell, Colin Wilburn, Hongyang Yao, Masashi Yokochi

Nucleic Acids Research　Vol. 51　No. D1　p. D368-D376　2022/12/07　Research paper (scientific journal)

An Artificial Metallolyase with Pliable 2-His-1-Carboxylate Facial Triad for Stereoselective Michael Addition

Ryusei Matsumoto, Saho Yoshioka, Miho Yuasa, Yoshitsugu Morita, Genji Kurisu, Nobutaka Fujieda

2022/11/30　Research paper (scientific journal)

Structural insights into blue-green light utilization by marine green algal light harvesting complex II at 2.78 Å

Soichiro Seki, Tetsuko Nakaniwa, Pablo Castro-Hartmann, Kasim Sader, Akihiro Kawamoto, Hideaki Tanaka, Pu Qian, Genji Kurisu, Ritsuko Fujii

BBA Advances　Vol. 2　2022/11/11　Research paper (scientific journal)

Crystal structure and reaction mechanism of a bacterial Mg-dechelatase homolog from the Chloroflexi Anaerolineae.

Debayan Dey, Masayoshi Nishijima, Ryouichi Tanaka, Genji Kurisu, Hideaki Tanaka, Hisashi Ito

Protein science : a publication of the Protein Society　Vol. 31　No. 10　2022/10　Research paper (scientific journal)

Structural insights into the substrate specificity of IMP-6 and IMP-1 metallo-β-lactamases.

Keizo Yamamoto, Hideaki Tanaka, Genji Kurisu, Ryuichi Nakano, Hisakazu Yano, Hiromi Sakai

Journal of biochemistry　Vol. 173　No. 1　p. 21-30　2022/09/29　Research paper (scientific journal)

Structure of cyanobacterial photosystem I complexed with ferredoxin at 1.97 Å resolution.

Jiannan Li, Noriyuki Hamaoka, Fumiaki Makino, Akihiro Kawamoto, Yuxi Lin, Matthias Rögner, Marc M Nowaczyk, Young-Ho Lee, Keiichi Namba, Christoph Gerle, Genji Kurisu

Communications biology　Vol. 5　No. 1　p. 951-951　2022/09/12　Research paper (scientific journal)

Structures of Multisubunit Membrane Complexes With the CRYO ARM 200.

Christoph Gerle, Jun-Ichi Kishikawa, Tomoko Yamaguchi, Atsuko Nakanishi, Orkun Çoruh, Fumiaki Makino, Tomoko Miyata, Akihiro Kawamoto, Ken Yokoyama, Keiichi Namba, Genji Kurisu, Takayuki Kato

Microscopy (Oxford, England)　Vol. 71　No. 5　p. 249-261　2022/07/21　Research paper (scientific journal)

PDBx/mmCIF Ecosystem: Foundational Semantic Tools for Structural Biology.

John D Westbrook, Jasmine Y Young, Chenghua Shao, Zukang Feng, Vladimir Guranovic, Catherine L Lawson, Brinda Vallat, Paul D Adams, John M Berrisford, Gerard Bricogne, Kay Diederichs, Robbie P Joosten, Peter Keller, Nigel W Moriarty, Oleg V Sobolev, Sameer Velankar, Clemens Vonrhein, David G Waterman, Genji Kurisu, Helen M Berman, Stephen K Burley, Ezra Peisach

Journal of molecular biology　Vol. 434　No. 11　p. 167599-167599　2022/06/15　Research paper (scientific journal)

LcaR: a regulatory switch from Pseudomonas aeruginosa for bioengineering alkane degrading bacteria.

Erandika H Hemamali, Laksiri P Weerasinghe, Hideaki Tanaka, Genji Kurisu, Inoka C Perera

Biodegradation　Vol. 33　No. 2　p. 117-133　2022/04　Research paper (scientific journal)

Energy transfer fluctuation observed by single-molecule spectroscopy of red-shifted bacteriochlorophyll in the homodimeric photosynthetic reaction center

Toru Kondo, Risa Mutoh, Shun Arai, Genji Kurisu, Hirozo Oh-oka, Satoru Fujiyoshi, Michio Matsushita

The Journal of Chemical Physics　Vol. 156　No. 10　p. 105102-105102　2022/03/14　Research paper (scientific journal)

Isothermal titration calorimetry of membrane protein interactions: FNR and the cytochrome b6f complex

Stanislav D. Zakharov, Sergei Savikhin, Yuko Misumi, Genji Kurisu, William A. Cramer

Biophysical Journal　Vol. 121　No. 2　p. 300-308　2022/01　Research paper (scientific journal)

Protein Data Bank Japan: Celebrating our 20th anniversary during a global pandemic as the Asian hub of three dimensional macromolecular structural data

Gert‐Jan Bekker, Masashi Yokochi, Hirofumi Suzuki, Yasuyo Ikegawa, Takeshi Iwata, Takahiro Kudou, Kei Yura, Toshimichi Fujiwara, Takeshi Kawabata, Genji Kurisu

Protein Science　Vol. 31　No. 1　p. 173-186　2022/01　Research paper (scientific journal)

Fifty years of Protein Data Bank in the Journal of Biochemistry

Genji Kurisu

The Journal of Biochemistry　Vol. 171　No. 1　p. 3-11　2021/12/02　Research paper (scientific journal)

Cryo-EM structure of a functional monomeric Photosystem I from Thermosynechococcus elongatus reveals red chlorophyll cluster

Orkun Çoruh, Anna Frank, Hideaki Tanaka, Akihiro Kawamoto, Eithar El-Mohsnawy, Takayuki Kato, Keiichi Namba, Christoph Gerle, Marc M. Nowaczyk, Genji Kurisu

Communications Biology　Vol. 4　No. 1　2021/12　Research paper (scientific journal)

Forty years of the structure of plant-type ferredoxin

Genji Kurisu, Tomitake Tsukihara

The Journal of Biochemistry　Vol. 171　No. 1　p. 19-21　2021/10/18　Research paper (scientific journal)

Modernized Uniform Representation of Carbohydrate Molecules in theProtein Data Bank.

Chenghua Shao, Zukang Feng, John D Westbrook, Ezra Peisach, John Berrisford, Yasuyo Ikegawa, Genji Kurisu, Sameer Velankar, Stephen K Burley, Jasmine Y Young

Glycobiology　Vol. 31　No. 9　p. 1204-1218　2021/05/08　Research paper (scientific journal)

The Protein Data Bank Archive

Sameer Velankar, Stephen K. Burley, Genji Kurisu, Jeffrey C. Hoch, John L. Markley

Methods in Molecular Biology　Vol. 2305　p. 3-21　2021/05　Part of collection (book)

Crystallographic analysis and phasing of iron-assimilating protein 1 (FEA1) from Chlamydomonas reinhardtii.

Linda Juniar, Vida Adlfar, Michael Hippler, Hideaki Tanaka, Genji Kurisu

Acta crystallographica. Section F, Structural biology communications　Vol. 77　No. Pt 5　p. 134-139　2021/05/01　Research paper (scientific journal)

Enhanced validation of small-molecule ligands and carbohydrates in the Protein Data Bank

Zukang Feng, John D. Westbrook, Raul Sala, Oliver S. Smart, Gérard Bricogne, Masaaki Matsubara, Issaku Yamada, Shinichiro Tsuchiya, Kiyoko F. Aoki-Kinoshita, Jeffrey C. Hoch, Genji Kurisu, Sameer Velankar, Stephen K. Burley, Jasmine Y. Young

Structure　Vol. 29　No. 4　p. 393-400.e1　2021/04　Research paper (scientific journal)

Crystal structure of higher plant heme oxygenase-1 and its mechanism of interaction with ferredoxin

Rei Tohda, Hideaki Tanaka, Risa Mutoh, Xuhong Zhang, Young-Ho Lee, Tsuyoshi Konuma, Takahisa Ikegami, Catharina T. Migita, Genji Kurisu

Journal of Biological Chemistry　Vol. 296　p. 100217-100217　2021　Research paper (scientific journal)

Structural basis for thioredoxin isoform‐based fine‐tuning of ferredoxin‐thioredoxin reductase activity

Linda Juniar, Hideaki Tanaka, Keisuke Yoshida, Toru Hisabori, Genji Kurisu

Protein Science　Vol. 29　No. 12　p. 2538-2545　2020/12　Research paper (scientific journal)

Dialysis-related amyloidosis associated with a novel β2-microglobulin variant

Hiroki Mizuno, Junichi Hoshino, Masatomo So, Yuta Kogure, Takeshi Fujii, Yoshifumi Ubara, Kenmei Takaichi, Tetsuko Nakaniwa, Hideaki Tanaka, Genji Kurisu, Fuyuki Kametani, Mayuko Nakagawa, Tsuneaki Yoshinaga, Yoshiki Sekijima, Keiichi Higuchi, Yuji Goto, Masahide Yazaki

Amyloid　Vol. 28　No. 1　p. 1-8　2020/09/02　Research paper (scientific journal)

Copper–Oxygen Dynamics in the Tyrosinase Mechanism

Nobutaka Fujieda, Kyohei Umakoshi, Yuta Ochi, Yosuke Nishikawa, Sachiko Yanagisawa, Minoru Kubo, Genji Kurisu, Shinobu Itoh

Angewandte Chemie International Edition　Vol. 59　No. 32　p. 13385-13390　2020/08/03　Research paper (scientific journal)

Chlorophyllide a oxidoreductase Preferentially Catalyzes 8‐Vinyl Reduction over B‐Ring Reduction of 8‐Vinyl Chlorophyllide a in the Late Steps of Bacteriochlorophyll Biosynthesis

Haruki Yamamoto, Tadashi Mizoguchi, Yusuke Tsukatani, Hitoshi Tamiaki, Genji Kurisu, Yuichi Fujita

ChemBioChem　Vol. 21　No. 12　p. 1760-1766　2020/06/15　Research paper (scientific journal)

X-ray dose-dependent structural changes of the [2Fe-2S] ferredoxin from Chlamydomonas reinhardtii.

Yusuke Ohnishi, Norifumi Muraki, Daiki Kiyota, Hideo Okumura, Seiki Baba, Yoshiaki Kawano, Takashi Kumasaka, Hideaki Tanaka, Genji Kurisu

Journal of Biochemistry　Vol. 167　No. 6　p. 549-555　2020/06/01　Research paper (scientific journal)

Copper–Oxygen Dynamics in the Tyrosinase Mechanism

Nobutaka Fujieda, Kyohei Umakoshi, Yuta Ochi, Yosuke Nishikawa, Sachiko Yanagisawa, Minoru Kubo, Genji Kurisu, Shinobu Itoh

Angewandte Chemie　Vol. 132　No. 32　p. 13487-13492　2020/05/26　Research paper (scientific journal)

Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes

Nobutaka Fujieda, Haruna Ichihashi, Miho Yuasa, Yosuke Nishikawa, Genji Kurisu, Shinobu Itoh

Angewandte Chemie　Vol. 132　No. 20　p. 7791-7794　2020/05/11　Research paper (scientific journal)

Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes

Nobutaka Fujieda, Haruna Ichihashi, Miho Yuasa, Yosuke Nishikawa, Genji Kurisu, Shinobu Itoh

Angewandte Chemie International Edition　Vol. 59　No. 20　p. 7717-7720　2020/05/11　Research paper (scientific journal)

Cryogenic Single-Molecule Spectroscopy of the Primary Electron Acceptor in the Photosynthetic Reaction Center.

Toru Kondo, Risa Mutoh, Hiroaki Tabe, Genji Kurisu, Hirozo Oh-Oka, Satoru Fujiyoshi, Michio Matsushita

The journal of physical chemistry letters　p. 3980-3986　2020/05/06

The complex of outer-arm dynein light chain-1 and the microtubule-binding domain of the γ heavy chain shows how axonemal dynein tunes ciliary beating.

Akiyuki Toda, Yosuke Nishikawa, Hideaki Tanaka, Toshiki Yagi, Genji Kurisu

Journal of Biological Chemistry　Vol. 295　No. 12　p. 3982-3989　2020/03/20　Research paper (scientific journal)

The Biological Structure Model Archive (BSM-Arc): an archive for in silico models and simulations

Gert-Jan Bekker, Takeshi Kawabata, Genji Kurisu

Biophysical Reviews　2020/02/05　Research paper (scientific journal)

Chemical synthesis of ferredoxin with 4 selenocysteine residues using a segment condensation method

Toshiki Takei, Tomoshige Ando, Toshifumi Takao, Yusuke Ohnishi, Genji Kurisu, Michio Iwaoka, Hironobu Hojo

Chemical Communications　Vol. 56　No. 91　p. 14239-14242　2020　Research paper (scientific journal)

Continuum mechanical parameterisation of cytoplasmic dynein from atomistic simulation

Benjamin S. Hanson, Shinji Iida, Daniel J. Read, Oliver G. Harlen, Genji Kurisu, Haruki Nakamura, Sarah A. Harris

Methods　Vol. 185　p. 39-48　2020/01　Research paper (scientific journal)

Calcium sensing via EF-hand 4 enables thioredoxin activity in the sensor-responder protein calredoxin in the green alga Chlamydomonas reinhardtii.

Charoenwattanasatien R, Zinzius K, Scholz M, Wicke S, Tanaka H, Brandenburg JS, Marchetti GM, Ikegami T, Matsumoto T, Oda T, Sato M, Hippler M, Kurisu G

The Journal of biological chemistry　Vol. 295　No. 1　p. 170-180　2020/01　Research paper (scientific journal)

Kinetic and structural insight into a role of the re-face Tyr328 residue of the homodimer type ferredoxin-NADP+ oxidoreductase from Rhodopseudomonas palustris in the reaction with NADP+/NADPH.

Daisuke Seo, Norifumi Muraki, Genji Kurisu

Biochimica et biophysica acta. Bioenergetics　Vol. 1861　No. 3　p. 148140-148140　2019/12/12　Research paper (scientific journal)

Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures

Helen M. Berman, Paul D. Adams, Alexandre A. Bonvin, Stephen K. Burley, Bridget Carragher, Wah Chiu, Frank DiMaio, Thomas E. Ferrin, Margaret J. Gabanyi, Thomas D. Goddard, Patrick R. Griffin, Juergen Haas, Christian A. Hanke, Jeffrey C. Hoch, Gerhard Hummer, Genji Kurisu, Catherine L. Lawson, Alexander Leitner, John L. Markley, Jens Meiler, Gaetano T. Montelione, George N. Phillips, Thomas Prisner, Juri Rappsilber, David C. Schriemer, Torsten Schwede, Claus A.M. Seidel, Timothy S. Strutzenberg, Dmitri I. Svergun, Emad Tajkhorshid, Jill Trewhella, Brinda Vallat, Sameer Velankar, Geerten W. Vuister, Benjamin Webb, John D. Westbrook, Kate L. White, Andrej Sali

Structure　Vol. 27　No. 12　p. 1745-1759　2019/12　Research paper (scientific journal)

Multicolor redox sensor proteins can visualize redox changes in various compartments of the living cell.

Sugiura K, Tanaka H, Kurisu G, Wakabayashi KI, Hisabori T

Biochimica et biophysica acta. General subjects　Vol. 1863　No. 6　p. 1098-1107　2019/06

Announcing mandatory submission of PDBx/mmCIF format files for crystallographic depositions to the Protein Data Bank (PDB).

Adams PD, Afonine PV, Baskaran K, Berman HM, Berrisford J, Bricogne G, Brown DG, Burley SK, Chen M, Feng Z, Flensburg C, Gutmanas A, Hoch JC, Ikegawa Y, Kengaku Y, Krissinel E, Kurisu G, Liang Y, Liebschner D, Mak L, Markley JL, Moriarty NW, Murshudov GN, Noble M, Peisach E, Persikova I, Poon BK, Sobolev OV, Ulrich EL, Velankar S, Vonrhein C, Westbrook J, Wojdyr M, Yokochi M, Young JY

Acta crystallographica. Section D, Structural biology　Vol. 75　No. Pt 4　p. 451-454　2019/04

Electron transport pathways in isolated chromoplasts from Narcissus pseudonarcissus L

Grabsztunowicz M, Mulo P, Baymann F, Mutoh R, Kurisu G, Sétif P, Beyer P, Krieger-Liszkay A

Plant Journal　2019/03　Research paper (scientific journal)

Protein Data Bank: the single global archive for 3D macromolecular structure data.

Stephen K. Burley, Helen M. Berman, Charmi Bhikadiya, Chunxiao Bi, Li Chen, Luigi Di Costanzo, Cole Christie, Jose M. Duarte, Shuchismita Dutta, Zukang Feng, Sutapa Ghosh, David S. Goodsell, Rachel Kramer Green, Vladimir Guranovic, Dmytro Guzenko, Brian P. Hudson, Yuhe Liang, Robert Lowe, Ezra Peisach, Irina Periskova, Chris Randle, Alexander Rose, Monica Sekharan, Chenghua Shao, Yi-Ping Tao, Yana Valasatava, Maria Voigt, John Westbrook, Jasmine Young, Christine Zardecki, Marina Zhuravleva, Genji Kurisu, Haruki Nakamura, Yumiko Kengaku, Hasumi Cho, Junko Sato, Ju Yaen Kim, Yasuyo Ikegawa, Atsushi Nakagawa, Reiko Yamashita, Takahiro Kudou, Gert-Jan Bekker, Hirofumi Suzuki, Takeshi Iwata, Masashi Yokochi, Naohiro Kobayashi, Toshimichi Fujiwara, Sameer Velankar, Gerard J. Kleywegt, Stephen Anyango, David R. Armstrong, John M. Berrisford, Matthew J. Conroy, Jose M. Dana, Mandar Deshpande, Paul Gane, Romana Gáborov, Deepti Gupta, Aleksandras Gutmanas, Jaroslav Koča, Lora Mak, Saqib Mir, Abhik Mukhopadhyay, Nurul Nadzirin, Sreenath Nair, Ardan Patwardhan, Typhaine Paysan-Lafosse, Lukas Pravda, Osman Salih, David Sehnal, Mihaly Varadi, Radka Vařekov, John L. Markley, Jeffrey C. Hoch, Pedro R. Romero, Kumaran Baskaran, Dimitri Maziuk, Eldon L. Ulrich, Jonathan R. Wedell, Hongyang Yao, Miron Livny, Yannis E. Ioannidi

Nucleic Acids Research　Vol. 47　No. D1　p. D520-D528　2019/02　Research paper (scientific journal)

Structural atlas of dynein motors at atomic resolution

Akiyuki Toda, Hideaki Tanaka, Genji Kurisu

Biophysical Reviews　Vol. 10　No. 2　p. 677-686　2018/04/01

Structural atlas of dynein motors at atomic resolution

Akiyuki Toda, Hideaki Tanaka, Genji Kurisu

Biophysical Reviews　Vol. 10　No. 2　p. 677-686　2018/04/01　Research paper (scientific journal)

Worldwide Protein Data Bank biocuration supporting open access to high-quality 3D structural biology data

Young, J.Y., Westbrook, J.D., Feng, Z., Peisach, E., Persikova, I., Sala, R., Sen, S., Berrisford, J.M., Swaminathan, G.J., Oldfield, T.J., Gutmanas, A., Igarashi, R., Armstrong, D.R., Baskaran, K., Chen, L., Chen, M., Clark, A.R., Di Costanzo, L., Dimitropoulos, D., Gao, G., Ghosh, S., Gore, S., Guranovic, V., Hendrickx, P.M.S., Hudson, B.P., Ikegawa, Y., Kengaku, Y., Lawson, C.L., Liang, Y., Mak, L., Mukhopadhyay, A., Narayanan, B., Nishiyama, K., Patwardhan, A., Sahni, G., Sanz-Garc{\'i}a, E., Sato, J., Sekharan, M.R., Shao, C., Smart, O.S., Tan, L., Van Ginkel, G., Yang, H., Zhuravleva, M.A., Markley, J.L., Nakamura, H., Kurisu, G., Kleywegt, G.J., Velankar, S., Berman, H.M., Burley, S.K.

Database　Vol. 2018　No. 2018　2018/02　Research paper (scientific journal)

X-ray crystallographic and high-speed AFM studies of peroxiredoxin 1 from Chlamydomonas reinhardtii

Ratana Charoenwattanasatien, Hideaki Tanaka, Karen Zinzius, Ana K. Hochmal, Risa Mutoh, Daisuke Yamamoto, Michael Hippler, Genji Kurisu

Acta Crystallographica Section F: Structural Biology Communications　Vol. 74　No. 2　p. 86-91　2018/02/01　Research paper (scientific journal)

New tools and functions in data-out activities at Protein Data Bank Japan (PDBj).

Akira R Kinjo, Gert-Jan Bekker, Hiroshi Wako, Shigeru Endo, Yuko Tsuchiya, Hiromu Sato, Hafumi Nishi, Kengo Kinoshita, Hirofumi Suzuki, Takeshi Kawabata, Masashi Yokochi, Takeshi Iwata, Naohiro Kobayashi, Toshimichi Fujiwara, Genji Kurisu, Haruki Nakamura

Protein science : a publication of the Protein Society　Vol. 27　No. 1　p. 95-102　2018/01　Research paper (scientific journal)

Gallium ferredoxin as a tool to study the effects of ferredoxin binding to photosystem I without ferredoxin reduction

Clara Mignee, Risa Mutoh, Anja Krieger-Liszkay, Genji Kurisu, Pierre Setif

PHOTOSYNTHESIS RESEARCH　Vol. 134　No. 3　p. 251-263　2017/12　Research paper (scientific journal)

Association of Ferredoxin:NADP(+) oxidoreductase with the photosynthetic apparatus modulates electron transfer in Chlamydomonas reinhardtii

Laura Mosebach, Claudia Heilmann, Risa Mutoh, Philipp Gaebelein, Janina Steinbeck, Thomas Happe, Takahisa Ikegami, Guy Hanke, Genji Kurisu, Michael Hippler

PHOTOSYNTHESIS RESEARCH　Vol. 134　No. 3　p. 291-306　2017/12　Research paper (scientific journal)

Structural basis for the isotype-specific interactions of ferredoxin and ferredoxin: NADP(+) oxidoreductase: an evolutionary switch between photosynthetic and heterotrophic assimilation

Fumio Shinohara, Genji Kurisu, Guy Hanke, Caroline Bowsher, Toshiharu Hase, Yoko Kimata-Ariga

PHOTOSYNTHESIS RESEARCH　Vol. 134　No. 3　p. 281-289　2017/12　Research paper (scientific journal)

PDB-Dev: a Prototype System for Depositing Integrative/Hybrid Structural Models

Stephen K. Burley, Genji Kurisu, John L. Markley, Haruki Nakamura, Sameer Velankar, Helen M. Berman, Andrej Sali, Torsten Schwede, Jill Trewhella

STRUCTURE　Vol. 25　No. 9　p. 1317-1318　2017/09

New tools and functions in data-out activities at Protein Data Bank Japan (PDBj)

Kinjo AR, Bekker GJ, Wako H, Endo S, Tsuchiya Y, Sato H, Nishi H, Kinoshita K, Suzuki H, Kawabata T, Yokochi M, Iwata T, Kobayashi N, Fujiwara T, Kurisu G, Nakamura H

Protein Science　2017/08　Research paper (scientific journal)

Dynamics and energetics of cyanobacterial photosystem I:ferredoxin complexes in different redox states

Pierre Setif, Risa Mutoh, Genji Kurisu

BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS　Vol. 1858　No. 7　p. 483-496　2017/07　Research paper (scientific journal)

A Well-Defined Osmium-Cupin Complex: Hyperstable Artificial Osmium Peroxygenase

Nobutaka Fujieda, Takumi Nakano, Yuki Taniguchi, Haruna Ichihashi, Hideki Sugimoto, Yuma Morimoto, Yosuke Nishikawa, Genji Kurisu, Shinobu Itoh

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY　Vol. 139　No. 14　p. 5149-5155　2017/04　Research paper (scientific journal)

Hyperfine Sublevel Correlation Spectroscopy Studies of Iron-Sulfur Cluster in Rieske Protein from Green Sulfur Bacterium Chlorobaculum tepidum

Hiroki Nagashima, Hiraku Kishimoto, Risa Mutoh, Naotaka Terashima, Hirozo Oh-oka, Genji Kurisu, Hiroyuki Mino

JOURNAL OF PHYSICAL CHEMISTRY B　Vol. 121　No. 12　p. 2543-2553　2017/03　Research paper (scientific journal)

Energetic basis on interactions between ferredoxin and ferredoxin NADP(+) reductase at varying physiological conditions

Misaki Kinoshita, Ju Yaen Kim, Satoshi Kume, Yuxi Lin, K. Hun Mok, Yosky Kataoka, Koichiro Ishimori, Natalia Markova, Genji Kurisu, Toshiharu Hase, Young-Ho Lee

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS　Vol. 482　No. 4　p. 909-915　2017/01　Research paper (scientific journal)

Non-covalent forces tune the electron transfer complex between ferredoxin and sulfite reductase to optimize enzymatic activity

Ju Yaen Kim, Misaki Kinoshita, Satoshi Kume, G. T. Hanke, Toshihiko Sugiki, John E. Ladbury, Chojiro Kojima, Takahisa Ikegami, Genji Kurisu, Yuji Goto, Toshiharu Hase, Young-Ho Lee

BIOCHEMICAL JOURNAL　Vol. 473　No. 21　p. 3837-3854　2016/11　Research paper (scientific journal)

Elastic properties of dynein motor domain obtained from all-atom molecular dynamics simulations

Narutoshi Kamiya, Tadaaki Mashimo, Yu Takano, Takahide Kon, Genji Kurisu, Haruki Nakamura

PROTEIN ENGINEERING DESIGN & SELECTION　Vol. 29　No. 8　p. 317-325　2016/08　Research paper (scientific journal)

Structural and mutational studies of an electron transfer complex of maize sulfite reductase and ferredoxin

Ju Yaen Kim, Masato Nakayama, Hiroshi Toyota, Genji Kurisu, Toshiharu Hase

JOURNAL OF BIOCHEMISTRY　Vol. 160　No. 2　p. 101-109　2016/08　Research paper (scientific journal)

Bacterial beta-Glucosidase Reveals the Structural and Functional Basis of Genetic Defects in Human Glucocerebrosidase 2 (GBA2)

Ratana Charoenwattanasatien, Salila Pengthaisong, Imogen Breen, Risa Mutoh, Sompong Sansenya, Yanling Hua, Anupong Tankrathok, Liang Wu, Chomphunuch Songsiriritthigul, Hideaki Tanaka, Spencer J. Williams, Gideon J. Davies, Genji Kurisu, James R. Ketudat Cairns

ACS CHEMICAL BIOLOGY　Vol. 11　No. 7　p. 1891-1900　2016/07　Research paper (scientific journal)

Structural Change in the Dynein Stalk Region Associated with Two Different Affinities for the Microtubule

Yosuke Nishikawa, Momoko Inatomi, Haruka Iwasaki, Genji Kurisu

JOURNAL OF MOLECULAR BIOLOGY　Vol. 428　No. 9　p. 1886-1896　2016/05　Research paper (scientific journal)

Structural analysis of "Dynein", a huge molecular motor working in the cells

Vol. 29　No. 2　p. 1-8　2016/03

Thermodynamics of protein-protein interactions examined by isothermal titration calorimetry

Ju Yaen Kim, Misaki Kinoshita, Takashi Inui, Genji Kurisu, Yuji Goto, Toshiharu Hase, Koichiro Ishimori, Young Ho Lee

Protein-Protein Interactions (PPIs): Types, Methods for Detection and Analysis　p. 67-79　2016/01/01　Part of collection (book)

A structural view of synthetic cofactor integration into [FeFe]-hydrogenases

J. Esselborn, N. Muraki, K. Klein, V. Engelbrecht, N. Metzler-Nolte, U. -P. Apfel, E. Hofmann, G. Kurisu, T. Happe

CHEMICAL SCIENCE　Vol. 7　No. 2　p. 959-968　2016　Research paper (scientific journal)

Functional Dynamics Revealed by the Structure of the SufBCD Complex, a Novel ATP-binding Cassette (ABC) Protein That Serves as a Scaffold for Iron-Sulfur Cluster Biogenesis

Kei Hirabayashi, Eiki Yuda, Naoyuki Tanaka, Sumie Katayama, Kenji Iwasaki, Takashi Matsumoto, Genji Kurisu, F. Wayne Outten, Keiichi Fukuyama, Yasuhiro Takahashi, Kei Wada

JOURNAL OF BIOLOGICAL CHEMISTRY　Vol. 290　No. 50　p. 29717-29731　2015/12　Research paper (scientific journal)

X-ray Structure and Nuclear Magnetic Resonance Analysis of the Interaction Sites of the Ga-Substituted Cyanobacterial Ferredoxin.

Risa Mutoh, Norifumi Muraki, Kanako Shinmura, Hisako Kubota-Kawai, Young-Ho Lee, Marc M Nowaczyk, Matthias Rögner, Toshiharu Hase, Takahisa Ikegami, Genji Kurisu

Biochemistry　Vol. 54　No. 39　p. 6052-61　2015/10/06　Research paper (scientific journal)

Physicochemical nature of interfaces controlling ferredoxin NADP(+) reductase activity through its interprotein interactions with ferredoxin

Misaki Kinoshita, Ju Yaen Kim, Satoshi Kume, Yukiko Sakakibara, Toshihiko Sugiki, Chojiro Kojima, Genji Kurisu, Takahisa Ikegami, Toshiharu Hase, Yoko Kimata-Ariga, Young-Ho Lee

BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS　Vol. 1847　No. 10　p. 1200-1211　2015/10　Research paper (scientific journal)

Direct evidence for the atovaquone action on the Plasmodium cytochrome bc(1) complex

Josephine E. Siregar, Genji Kurisu, Tamaki Kobayashi, Motomichi Matsuzaki, Kimitoshi Sakamoto, Fumika Mi-ichi, Yoh-ichi Watanabe, Makoto Hirai, Hiroyuki Matsuoka, Din Syafruddin, Sangkot Marzuki, Kiyoshi Kita

PARASITOLOGY INTERNATIONAL　Vol. 64　No. 3　p. 295-300　2015/06　Research paper (scientific journal)

Expression and crystallization of a bacterial glycoside hydrolase family 116 β-glucosidase from Thermoanaerobacterium xylanolyticum

Sompong Sansenya, Risa Mutoh, Ratana Charoenwattanasatien, Genji Kurisu, James R. Ketudat Cairns

Acta Crystallographica Section F:Structural Biology Communications　Vol. 71　p. 41-44　2015/01/01　Research paper (scientific journal)

A flipped ion pair at the dynein-microtubule interface is critical for dynein motility and ATPase activation

Seiichi Uchimura, Takashi Fujii, Hiroko Takazaki, Rie Ayukawa, Yosuke Nishikawa, Itsushi Minoura, You Hachikubo, Genji Kurisu, Kazuo Sutoh, Takahide Kon, Keiichi Namba, Etsuko Muto

JOURNAL OF CELL BIOLOGY　Vol. 208　No. 2　p. 211-222　2015/01　Research paper (scientific journal)

Structure of the Entire Stalk Region of the Dynein Motor Domain

Yosuke Nishikawa, Takuji Oyama, Narutoshi Kamiya, Takahide Kon, Yoko Y. Toyoshima, Haruki Nakamura, Genji Kurisu

JOURNAL OF MOLECULAR BIOLOGY　Vol. 426　No. 19　p. 3232-3245　2014/09　Research paper (scientific journal)

Crystallization and preliminary X-ray diffraction analysis of domain-chimeric L-(2S,3S)-butanediol dehydrogenase

Tomohito Shimegi, Takuji Ooyama, Takashi Ohtsuki, Genji Kurisu, Masami Kusunoki, Sadaharu Ui

ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS　Vol. 70　No. Pt 4　p. 461-463　2014/04　Research paper (scientific journal)

Crystal structures of copper-depleted and copper-bound fungal pro-tyrosinase: insights into endogenous cysteine-dependent copper incorporation.

Nobutaka Fujieda, Shintaro Yabuta, Takuya Ikeda, Takuji Oyama, Norifumi Muraki, Genji Kurisu, Shinobu Itoh

The Journal of biological chemistry　Vol. 288　No. 30　p. 22128-40　2013/07/26　Research paper (scientific journal)

Concentration-dependent oligomerization of cross-linked complexes between ferredoxin and ferredoxin-NADP+ reductase.

Yoko Kimata-Ariga, Hisako Kubota-Kawai, Young-Ho Lee, Norifumi Muraki, Takahisa Ikegami, Genji Kurisu, Toshiharu Hase

Biochemical and biophysical research communications　Vol. 434　No. 4　p. 867-72　2013/05/17　Research paper (scientific journal)

[Structure and mechanism of cytoplasmic dynein].

Kon, T., Kurisu, G.

Seikagaku. The Journal of Japanese Biochemical Society　Vol. 85　No. 4　p. 272-275　2013/04　Research paper (scientific journal)

Crystal structure of ferredoxin-NAD(P)⁺ Reductase from the green sulfur bacterium chlorobaculum tepidum

Seo, D., Muraki, N., Shiba, T., Sakurai, T., Kurisu, G.

Advanced Topics in Science and Technology in China　2013　Research paper (scientific journal)

細胞質ダイニンの構造と機能

昆隆英, 栗栖源嗣

生化学　Vol. 85　p. 272-275　2013

Cloning, expression, crystallization and preliminary X-ray studies of the ferredoxin-NAD(P)+ reductase from the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1.

Pasqual Liauw, Tomohiro Mashiba, Marta Kopczak, Katrin Wiegand, Norifumi Muraki, Hisako Kubota, Yusuke Kawano, Masahiko Ikeuchi, Toshiharu Hase, Matthias Rögner, Genji Kurisu

Acta crystallographica. Section F, Structural biology and crystallization communications　Vol. 68　No. Pt 9　p. 1048-51　2012/09/01　Research paper (scientific journal)

N-terminal structure of maize ferredoxin:NADP+ reductase determines recruitment into different thylakoid membrane complexes.

Manuel Twachtmann, Bianca Altmann, Norifumi Muraki, Ingo Voss, Satoshi Okutani, Genji Kurisu, Toshiharu Hase, Guy T Hanke

The Plant cell　Vol. 24　No. 7　p. 2979-91　2012/07　Research paper (scientific journal)

A new structural insight into differential interaction of cyanobacterial and plant ferredoxins with nitrite reductase as revealed by NMR and X-ray crystallographic studies

Yukiko Sakakibara, Hitoshi Kimura, Akira Iwamura, Takashi Saitoh, Takahisa Ikegami, Genji Kurisu, Toshiharu Hase

JOURNAL OF BIOCHEMISTRY　Vol. 151　No. 5　p. 483-492　2012/05　Research paper (scientific journal)

Crystallization and preliminary X-ray studies of an electron-transfer complex of ferredoxin and ferredoxin-dependent glutamate synthase from the cyanobacterium Leptolyngbya boryana.

Kanako Shinmura, Norifumi Muraki, Ayako Yoshida, Toshiharu Hase, Genji Kurisu

Acta crystallographica. Section F, Structural biology and crystallization communications　Vol. 68　No. Pt 3　p. 324-7　2012/03/01　Research paper (scientific journal)

Membrane proteins in four acts: Function precedes structure determination

W. A. Cramer, S. D. Zakharov, S. Saif Hasan, H. Zhang, D. Baniulis, M. V. Zhalnina, G. M. Soriano, O. Sharma, J. C. Rochet, C. Ryan, J. Whitelegge, G. Kurisu, E. Yamashita

METHODS　Vol. 55　No. 4　p. 415-420　2011/12　Research paper (scientific journal)

Construction of a Tailor-Made L (2S, 3S)-Butanediol Dehydrogenase by Exchanging Domains Between Native Structural Analogs

Tomohito Shimegi, Yuhsuke Takusagawa, Takashi Ohtsuki, Satoko Noda, Genji Kurisu, Masami Kusunoki, Sadaharu Ui

PROTEIN AND PEPTIDE LETTERS　Vol. 18　No. 8　p. 825-830　2011/08　Research paper (scientific journal)

Crystal Structure of Dark-Operative Protochlorophyllide Reductase Reveals the Structural Basis for Nitrogenase-Like Enzymes

MURAKI Norifumi, KURISU Genji, NOMATA Jiro, FUJITA Yuichi

X-RAYS　Vol. 53　No. 2　p. 113-118　2011/04/30

Two Protochlorophyllide Reductases to Make Chlorophyll Green : Structural and Evolutionary Aspects

FUJITA Yuichi, KURISU Genji

Seibutsu Butsuri　Vol. 51　No. 2　p. 66-71　2011/03/25

Electronic structures of a [4Fe–4S] cluster, [Fe4S4(SCH3)3(CH3COO)], in dark-operative protochlorophyllide oxidoreductase (DPOR)

Yu Takano, Yasushige Yonezawa, Yuichi Fujita, Genji Kurisu, Haruki Nakamura

Chemical Physics Letters　Vol. 503　No. 4-6　p. 296-300　2011/02　Research paper (scientific journal)

A Conserved Lysine Residue in the Crenarchaea-Specific Loop is Important for the Crenarchaeal Splicing Endonuclease Activity

Maho Okuda, Tomoo Shiba, Daniel-Ken Inaoka, Kiyoshi Kita, Genji Kurisu, Shigeru Mineki, Shigeharu Harada, Yoh-ichi Watanabe, Shigeo Yoshinari

JOURNAL OF MOLECULAR BIOLOGY　Vol. 405　No. 1　p. 92-104　2011/01　Research paper (scientific journal)

Chlorophyll biosynthesis: spotlight on protochlorophyllide reduction.

Christiane Reinbothe, Majida El Bakkouri, Frank Buhr, Norifumi Muraki, Jiro Nomata, Genji Kurisu, Yuichi Fujita, Steffen Reinbothe

Trends in plant science　Vol. 15　No. 11　p. 614-24　2010/11　Research paper (scientific journal)

Asymmetric dimeric structure of ferredoxin-NAD(P)+ oxidoreductase from the green sulfur bacterium Chlorobaculum tepidum: implications for binding ferredoxin and NADP+.

Norifumi Muraki, Daisuke Seo, Tomoo Shiba, Takeshi Sakurai, Genji Kurisu

Journal of molecular biology　Vol. 401　No. 3　p. 403-14　2010/08/20　Research paper (scientific journal)

Structural basis for chiral substrate recognition by two 2,3-butanediol dehydrogenases

Masato Otagiri, Sadaharu Ui, Yuhsuke Takusagawa, Takashi Ohtsuki, Genji Kurisu, Masami Kusunoki

FEBS LETTERS　Vol. 584　No. 1　p. 219-223　2010/01　Research paper (scientific journal)

Functional importance of Crenarchaea-specific extra-loop revealed by an X-ray structure of a heterotetrameric crenarchaeal splicing endonuclease

Shigeo Yoshinari, Tomoo Shiba, Daniel-Ken Inaoka, Takashi Itoh, Genji Kurisu, Shigeharu Harada, Kiyoshi Kita, Yoh-ichi Watanabe

NUCLEIC ACIDS RESEARCH　Vol. 37　No. 14　p. 4787-4798　2009/08　Research paper (scientific journal)

Crystallization and preliminary X-ray studies of the chromophore-binding domain of cyanobacteriochrome AnPixJ from Anabaena sp. PCC 7120.

Rei Narikawa, Norifumi Muraki, Tomoo Shiba, Masahiko Ikeuchi, Genji Kurisu

Acta crystallographica. Section F, Structural biology and crystallization communications　Vol. 65　No. Pt 2　p. 159-62　2009/02/01　Research paper (scientific journal)

Structures of Trypanosoma cruzi dihydroorotate dehydrogenase complexed with substrates and products: Atomic resolution insights into mechanisms of dihydroorotate oxidation and fumarate reduction

Daniel Ken Inaoka, Kimitoshi Sakamoto, Hironari Shimizu, Tomoo Shiba, Genji Kurisu, Takeshi Nara, Takashi Aoki, Kiyoshi Kita, Shigeharu Harada

BIOCHEMISTRY　Vol. 47　No. 41　p. 10881-10891　2008/10　Research paper (scientific journal)

Crystallization and preliminary X-ray studies of ferredoxin-NAD(P)+ reductase from Chlorobium tepidum.

Norifumi Muraki, Daisuke Seo, Tomoo Shiba, Takeshi Sakurai, Genji Kurisu

Acta crystallographica. Section F, Structural biology and crystallization communications　Vol. 64　No. Pt 3　p. 186-9　2008/03/01　Research paper (scientific journal)

Cloning and characterization of ferredoxin and ferredoxin-NADP(+) reductase from human malaria parasite

Yoko Kimata-Ariga, Genji Kurisu, Masami Kusunoki, Sayaka Aoki, Dan Sato, Tamaki Kobayashi, Kiyoshi Kita, Toshihiro Horii, Toshiharu Hase

JOURNAL OF BIOCHEMISTRY　Vol. 141　No. 3　p. 421-428　2007/03　Research paper (scientific journal)

Atomic structure of plant glutamine synthetase - A key enzyme for plant productivity

Hideaki Unno, Tatsuya Uchida, Hajime Sugawara, Genji Kurisu, Tatsuo Sugiyama, Tomoyuki Yamaya, Hitoshi Sakakibara, Toshiharu Hase, Masami Kusunoki

JOURNAL OF BIOLOGICAL CHEMISTRY　Vol. 281　No. 39　p. 29287-29296　2006/09　Research paper (scientific journal)

2P141 Conserved residue Arg-193 at the catalytic site of plant sulfite reductase plays an important role for the specific substrate reduction(33. Redox enzyme,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Nakayama Masato, Kurisu Genji, Kusunoki Masami, Hase Toshiharu

Seibutsu Butsuri　Vol. 46　No. 2　2006

Intraprotein transfer of the quinone analogue inhibitor 2,5-dibromo-3-methyl-6-isopropyl-p-benzoquinone in the cytochrome b(6)f complex

JS Yan, G Kurisu, WA Cramer

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA　Vol. 103　No. 1　p. 69-74　2006/01　Research paper (scientific journal)

Transmembrane traffic in the cytochrome b(6)f complex

William A. Cramer, Huamin Zhang, Jiusheng Yan, Genji Kurisu, Janet L. Smith

ANNUAL REVIEW OF BIOCHEMISTRY　Vol. 75　p. 769-790　2006　Part of collection (book)

光合成タンパク質の形から知る植物の賢さ

栗栖 源嗣

生命誌　p. 45-48　2006

Binding sites of lipophilic quinone and quinone analogue inhibitors in the cytochrome b(6)f complex of oxygenic photosynthesis

WA Cramer, H Zhang, J Yan, G Kurisu

BIOCHEMICAL SOCIETY TRANSACTIONS　Vol. 33　p. 921-923　2005/11　Research paper (scientific journal)

Three maize leaf ferredoxin: NADPH oxidoreductases vary in subchloroplast location, expression, and interaction with ferredoxin

S Okutani, GT Hanke, Y Satomi, T Takao, G Kurisu, A Suzuki, T Hase

PLANT PHYSIOLOGY　Vol. 139　No. 3　p. 1451-1459　2005/11　Research paper (scientific journal)

[Structural studies on the photosynthetic electron transfer complexes].

Kurisu G

2005/08　Research paper (scientific journal)

Structure of the cytochrome b(6)f complex: new prosthetic groups, Q-space, and the "hors d'oeuvres hypothesis" for assembly of the complex

WA Cramer, JS Yan, HM Zhang, G Kurisu, JL Smith

PHOTOSYNTHESIS RESEARCH　Vol. 85　No. 1　p. 133-144　2005/07　Research paper (scientific journal)

[Molecular mechanism of protein import through receptor complexes: implication of the complex structure of outer membrane receptor and colicin E3].

Genji K, Zakharov SD, Zhalnina MV, Cramer WA

2005/04　Research paper (scientific journal)

Structural studies on the photosynthetic electron transfer complexes

Kurisu, G.

Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme　Vol. 50　No. 10 Suppl　2005　Research paper (scientific journal)

Molecular mechanism of protein import through receptor complexes: implication of the complex structure of outer membrane receptor and colicin E3

Genji, K., Zakharov, S.D., Zhalnina, M.V., Cramer, W.A.

Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme　Vol. 50　No. 4　2005　Research paper (scientific journal)

3P017 Structural study of the electron transfer complex between plant-type Ferredoxin and Sulfite reductase

Kurisu G., Nakayama M., Toyoda H., Kusunoki M., Hase T.

Seibutsu Butsuri　Vol. 45　2005

NMR study of the interaction between plant sulfite reductase and ferredoxin

T Saitoh, H Toyota, M Nakayama, T Ikegami, G Kurisu, T Hase

Sulfur Transport and Assimilation in Plants in the Post Genomic Era　p. 87-89　2005　Research paper (international conference proceedings)

Structure and characterization of the active site of maize sulfite reductase

M Nakayama, G Kurisu, T Hase

Sulfur Transport and Assimilation in Plants in the Post Genomic Era　p. 83-86　2005　Research paper (international conference proceedings)

A structural basis of Equisetum arvense ferredoxin isoform II producing an alternative electron transfer with ferredoxin-NADP(+) reductase

G Kurisu, D Nishiyama, M Kusunoki, S Fujikawa, M Katoh, GT Hanke, T Hase, K Teshima

JOURNAL OF BIOLOGICAL CHEMISTRY　Vol. 280　No. 3　p. 2275-2281　2005/01　Research paper (scientific journal)

Molecular Mechanism of Cellular Import of Colicin E3 : Complex Structure of Vitamin B_<12> Receptor and Colicin E3 R-Domain

KURISU Genji

Biophysics　Vol. 45　No. 1　p. 32-35　2005

レセプター膜蛋白質を介した蛋白質の膜透過機構.

栗栖源嗣, Zakharov, S. D, Zhalnina, M. V, Cramer, W. A

蛋白質・核酸・酵素　Vol. 50　No. 4　p. 356-361　2005

光合成における電子伝達超分子系の役割

栗栖 源嗣

蛋白質・核酸・酵素　Vol. 50　p. 1167-1173　2005

Characteristic recognition of N-acetylgalactosamine by an invertebrate C-lype lectin, CEL-I, revealed by X-ray crystallographic analysis

H Sugawara, M Kuzunoki, G Kurisu, T Fujimoto, H Aoyagi, T Hatakeyama

JOURNAL OF BIOLOGICAL CHEMISTRY　Vol. 279　No. 43　p. 45219-45225　2004/10　Research paper (scientific journal)

Crystal structure of the hemolytic lectin CEL-III isolated from the marine invertebrate Cucumaria echinata - Implications of domain structure for its membrane pore-formation mechanism

T Uchida, T Yamasaki, S Eto, H Sugawara, G Kurisu, A Nakagawa, M Kusunoki, T Hatakeyama

JOURNAL OF BIOLOGICAL CHEMISTRY　Vol. 279　No. 35　p. 37133-37141　2004/08　Research paper (scientific journal)

Cytochrome bc complexes: a common core of structure and function surrounded by diversity in the outlying provinces

JL Smith, HM Zhang, JS Yan, G Kurisu, WA Cramer

CURRENT OPINION IN STRUCTURAL BIOLOGY　Vol. 14　No. 4　p. 432-439　2004/08

Photosynthetic Electron Transfer around Cytochrome b_6f Complex Based on its Crystal Structure

KURISU Genji

Seibutsu Butsuri　Vol. 44　No. 3　p. 130-133　2004/05/25

Evolution of photosynthesis: Time-independent structure of the cytochrome b(6)f complex

WA Cramer, HM Zhang, JS Yan, G Kurisu, JL Smith

BIOCHEMISTRY　Vol. 43　No. 20　p. 5921-5929　2004/05

Structure and function of the cytochrome b6f complex of oxygenic photosynthesis

Kurisu, G., Zhang, H., Smith, J.L., Cramer, W.A.

Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme　Vol. 49　No. 9　2004　Research paper (scientific journal)

1SD54 Structure and function of the cytochrome b_6f complex of oxygenic photosynthesis

Kurisu G.

Seibutsu Butsuri　Vol. 44　2004

Fd : FNR electron transfer complexes: evolutionary refinement of structural interactions

GT Hanke, G Kurisu, M Kusunoki, T Hase

PHOTOSYNTHESIS RESEARCH　Vol. 81　No. 3　p. 317-327　2004

A ferredoxin Arg-Glu pair important for efficient electron transfer between ferredoxin and ferredoxin-NADP(+) reductase.

Teshima K, Fujita S, Hirose S, Nishiyama D, Kurisu G, Kusunoki M, Kimata-Ariga Y, Hase T

2003/07　Research paper (scientific journal)

A defined protein-detergent-lipid complex for crystallization of integral membrane proteins: The cytochrome b6f complex of oxygenic photosynthesis.

Zhang H, Kurisu G, Smith JL, Cramer WA

2003/04　Research paper (scientific journal)

A ferredoxin Arg-Glu pair important for efficient electron transfer between ferredoxin and ferredoxin-NADP⁺ reductase

Teshima, K., Fujita, S., Hirose, S., Nishiyama, D., Kurisu, G., Kusunoki, M., Kimata-Ariga, Y., Hase, T.

FEBS Letters　Vol. 546　No. 2-3　2003　Research paper (scientific journal)

Crystallization and preliminary crystallographic study of an invertebrate C-type lectin, CEL-I, from the marine invertebrate Cucumaria echinata

T Hatakeyama, N Matsuo, H Aoyagi, H Sugawara, T Uchida, G Kurisu, M Kusunoki

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY　Vol. 58　No. Pt 1　p. 143-144　2002/01　Research paper (scientific journal)

Crystallization and preliminary X-ray studies of meso-2,3-butanediol dehydrogenase from Klebsiella pneumoniae IAM1063.

Otagiri M, Kurisu G, Swaminathan S, Ui S, Yoneda S, Ohkuma M, Kudo T, Kusunoki M

Acta Crystallographica Section D: Biological Crystallography　Vol. 57　No. 6　2001/06　Research paper (scientific journal)

Crystal structure of meso-2,3-butanediol dehydrogenase in a complex with NAD+ and inhibitor mercaptoethanol at 1.7 A resolution for understanding of chiral substrate recognition mechanisms.

Otagiri M, Kurisu G, Ui S, Takusagawa Y, Ohkuma M, Kudo T, Kusunoki M

Journal of Biochemistry　Vol. 129　No. 2　2001/02　Research paper (scientific journal)

Crystal structure of glucose dehydrogenase from Bacillus megaterium IWG3 at 1.7 A resolution.

Yamamoto K, Kurisu G, Kusunoki M, Tabata S, Urabe I, Osaki S

Journal of Biochemistry　Vol. 129　No. 2　2001/02　Research paper (scientific journal)

Structure of the electron transfer complex between plant type ferredoxin and ferredoxin dependent assimilatory enzymes

Kurisu, G., Kusunoki, M., Kimata-Ariga, Y., Hase, T.

Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme　Vol. 46　No. 11 Suppl　2001　Research paper (scientific journal)

植物の電子伝達蛋白質複合体の構造研究

栗栖 源嗣

日本結晶学会誌　Vol. 43　p. 7-7　2001

Crystallization and preliminary X-ray studies of L-(+)-2,3-butanediol dehydrogenase from Brevibacterium saccharolyticum C-1012

Otagiri, M., Kurisu, G., Ui, S., Ohkuma, M., Kudo, T., Kusunoki, M.

Protein and Peptide Letters　Vol. 8　No. 1　2001　Research paper (scientific journal)

植物型フェレドキシンとフェレドキシン依存性酵素との複合体の立体構造

栗栖源嗣, 楠木正巳, 有賀洋子, 長谷俊治

蛋白質・核酸・酵素　Vol. 46　No. 46　p. 1661-1667　2001

光化学系 I 複合体の2.5Å分解能での結晶構造

栗栖 源嗣

蛋白質・核酸・酵素　Vol. 46　2001

:Structure Analysis of Electron Transfer Complex between Ferredoxin and Redox Enzymes

KURISU Genji, KIMATA-ARIGA Yoko, KUSUNOKI Masami, HASE Toshiharu

KAGAKU TO SEIBUTSU　Vol. 39　No. 10　p. 660-666　2001

Structural Studies on the Electron Transfer Complex from Higher Plant

KURISU Genji

X-RAYS　Vol. 43　No. 6　p. 399-404　2001

Structure of the zinc-binding site in the crystal structure of a zinc endoprotease from Streptomyces caespitosus at 1 A resolution

Kurisu, G., Kai, Y., Harada, S.

Journal of Inorganic Biochemistry　Vol. 82　No. 1-4　p. 225-228　2000/11　Research paper (scientific journal)

A flow cell suitable for time-resolved X-ray crystallography by the Laue method

Kuriso, G., Sugimoto, A., Kai, Y., Harada, S.

Journal of Applied Crystallography　Vol. 30　No. 5　p. 555-556　1997/10/01　Research paper (scientific journal)

Structure of the zinc endoprotease from Streptomyces caespitosus

Kurisu, G., Kinoshita, T., Sugimoto, A., Nagara, A., Kai, Y., Kasai, N., Harada, S.

Journal of Biochemistry　Vol. 121　No. 2　p. 304-308　1997/02/01　Research paper (scientific journal)

Characterization of a small metalloprotease from Streptomyces caespitosus with high specificity to aromatic residues

Kurisu, G., Sugimoto, A., Harada, S., Takagi, M., Imanaka, T., Kai, Y.

Journal of Fermentation and Bioengineering　Vol. 83　No. 6　p. 590-592　1997/01　Research paper (scientific journal)

Crystallization and preliminary X-ray studies of a protease from Pseudomonas aeruginosa

Harada, S., Nagara, A., Kurisu, G., Kai, Y.

Journal of Molecular Biology　Vol. 230　No. 4　p. 1315-1316　1993/04　Research paper (scientific journal)