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Spatial photonic Ising machine using a digital micromirror device
Yusuke Ogura, Takumi Sakabe, Suguru Shimomura, Hiroshi Yamashita, Hideyuki Suzuki, Jun Tanida
The Fifteenth Japan-Finland Joint Symposium on Optics in Engineering (OIE’25) 2025/01 Research paper (international conference proceedings)
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Performance-enhancing strategies in spatial photonic Ising machine
Yusuke Ogura
The 14th Korea-Japan Workshop on Digital Holography and Information Photonics (DHIP 2024) 2024/12 Research paper (international conference proceedings)
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Polarization Imaging via Polarization-Structured Illumination Microscope
Taiki Suzaki, Yusuke Ogura
The 14th Korea-Japan Workshop on Digital Holography and Information Photonics 2024/12 Research paper (international conference proceedings)
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Numerical evaluation of polarization-structuring computer generated holography with radially polarized light
Yusuke Ogura, Jun Tanida
14th International Conference on Optics-photonics Design & Fabrication (ODF'24) 2024/07 Research paper (international conference proceedings)
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Parallel processing of spatial photonic Ising machines using spatial multiplexing
Suguru Shimomura, Yusuke Ogura, Jun Tanida
Machine Learning in Photonics 2024/06/18 Research paper (international conference proceedings)
Publisher: SPIE
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Demonstration of quantum dot reservoir computing based on spatio-temporal optical processing
Naoya Tate, Seiya Yamaguchi, Shunichi Sakai, Suguru Shimomura, Takahiro Nishimura, Jun Kozuka, Yusuke Ogura, Jun Tanida
Applied Optics Vol. 63 No. 28 p. G30-G36 2024/05/30 Research paper (scientific journal)
Publisher: Optica Publishing Group
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Polarization-Structured Fine Pattern Generation by Computer Generated Holography,
Yusuke Ogura, Taiki Suzaki, Elena Ghanem, Jun Tanida
Informaiton Photonics 2024 (IP2024) 2024/04 Research paper (international conference proceedings)
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Numerical demonstration of spatial photonic Ising machine with parallel processing based on spatial multiplexing
Suguru Shimomura, Yusuke Ogura, Jun Tanida
Informaiton Photonics 2024 (IP2024) 2024/04 Research paper (international conference proceedings)
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Diattenuation imaging of artificial and biological samplesusing polarization-structured spot array
Taiki Suzaki, Yusuke Ogura, Jun Tanida
The 10th Biomedical Imaging and Sensing Conference (BISC2024) 2024/04 Research paper (international conference proceedings)
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Spatial-photonic Ising machine by space-division multiplexing with physically tunable coefficients of a multi-component model
Takumi Sakabe, Suguru Shimomura, Yusuke Ogura, Ken-ichi Okubo, Hiroshi Yamashita, Hideyuki Suzuki, Jun Tanida
Optics Express Vol. 31 No. 26 p. 44127-44138 2023/12/12 Research paper (scientific journal)
Publisher: Optica Publishing Group
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Polarization-structuring holography and its application to polarization imaging
Yusuke Ogura, Taiki Suzaki, Elena Ghanem, Jun Tanida
The 13th Japan-Korea International Workshop on Digital Holography and Information Photonics (DHIP2023 2023/12 Research paper (international conference proceedings)
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Spatial Photonic Ising Machine with Time/Space Division Multiplexing
Yusuke Ogura
Photonic Neural Networks with Spatiotemporal Dynamics p. 153-174 2023/10/17 Part of collection (book)
Publisher: Springer Nature Singapore
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Polarization-structured computer generated holography
Yusuke Ogura, Taiki Suzaki, Jun Tanida
Information Photonics 2023 (IP'23) 2023/09 Research paper (international conference proceedings)
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Performance analysis of spatio-temporal optical reservoir models based on quantum dot network structural features
Naoya Tate, Seiya Yamaguchi, Suguru Shimomura, Takahiro Nishimura, Jun Kozuka, Yusuke Ogura, Jun Tanida
Information Photonics 2023 (IP'23) 2023/09 Research paper (international conference proceedings)
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Low-Rank Combinatorial Optimization and Statistical Learning by Spatial Photonic Ising Machine
Hiroshi Yamashita, Ken-ichi Okubo, Suguru Shimomura, Yusuke Ogura, Jun Tanida, Hideyuki Suzuki
Physical Review Letters Vol. 131 No. 6 2023/08/07 Research paper (scientific journal)
Publisher: American Physical Society (APS)
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Computer generated holograms that generate a polarization-structured spot array
Yusuke Ogura, Taiki Suzaki, Jun Tanida
The Fourteenth Japan-Finland Joint Symposium on Optics in Engineering (OIE2023) 2023/08 Research paper (international conference proceedings)
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Function enhancement of spatial photonic Ising machine by parallel processing using space-division multiplexing
Suguru Shimomura, Ken-ichi Okubo, Hiroshi Yamashita, Yusuke Ogura, Hideyuki Suzuki, Jun Tanida
2023 Conference on Lasers and Electro-Optics/Europe - European Quantum Electronics Virtual Conferences (CLEO/Europe-EQEC 2023) 2023/06 Research paper (international conference proceedings)
Publisher: IEEE
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Numerical evaluation of fluorescence probe using excitation spectrum of FRET network
Yusuke Ogura, Keita Hayashi, Suguru Shimomura, Takahiro Nishimura, Jun Tanida
Biomedical Imaging and Sensing Conference 2023 (BISC 2023) 2023/04 Research paper (international conference proceedings)
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Control of solution property on multiplexed spatial- photonic Ising machine by tuning optical parameter
Takumi Sakabe, Suguru Shimomura, Yusuke Ogura, Ken-ichi Okubo, Hiroshi Yamashita, Hideyuki Suzuki, Jun Tanida
The 12th Korea-Japan Workshop on Digital Holography and Information Photonics (DHIP2022) 2022/12 Research paper (international conference proceedings)
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Addressing of fluorescence signals by spectral encoding
Yusuke Ogura, Keita Hayashi, Suguru Shimomura, Takahiro Nishimura, Jun Tanida
The 12th Korea-Japan Workshop on Digital Holography and Information Photonics (DHIP 2022) 2022/12 Research paper (international conference proceedings)
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Optical encoding for fluorescence addressing
Yusuke Ogura, Keita Hayashi, Suguru Shimomura, Takahiro Nishimura, Jun Tanida
SPIE Biomedical Imaging and Sensing Conference (BISC), 2022 GCBME/TSBME/BISC 2022/12 Research paper (international conference proceedings)
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Experimental Verification of Fluorescence Tags Using FRET Networks Responding to Molecular Inputs
Keita Hayashi, Yusuke Ogura, Suguru Shimomura, Takahiro Nishimura, Jun Tanida
13th International Conference on Optics-photonics Design & Fabrication (ODF'22) 2022/08/03 Research paper (international conference proceedings)
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Numerical demonstration of spatial photonic Ising machine by using time-division multiplexing
Suguru Shimomura, Ken-ichi Okubo, Hiroshi Yamashita, Yusuke Ogura, Hideyuki Suzuki, Jun Tanida
The 15th Pacific Rim Conference on Lasers and Electro-Optics 2022/07/31 Research paper (international conference proceedings)
Publisher: Optica Publishing Group
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Prediction performance of reservoir computing based on iterative function system using optical feedback
Suguru Shimomura, Naruki Segawa, Yusuke Ogura, Jun Tanida
Information Photonics 2022 (IP2022) 2022/04/22 Research paper (international conference proceedings)
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Quantum Dot Network-Based Reservoir Computing Using Spatio-Temporal Fluorescence Outputs
Shunichi Sakai, Akihiro Nakamura, Naoya Tate, Suguru Shimomura, Takahiro Nishimura, Jun Kozuka, Yusuke Ogura, Jun Tanida
Information Photonics 2022 (IP2022) 2022/04/22 Research paper (international conference proceedings)
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A wavelength-selectively excitable fluorescence system based on FRET towards photonically addressable nanoscale light sources
Yusuke Ogura, Keita Hayashi, Takehiro Mori, Suguru Shimomura, Takahiro Nishimura, Jun Tanida
Information Photonics 2022 (IP2022) 2022/04/20 Research paper (international conference proceedings)
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Quantitative analysis of nonlinear optical input/output of a quantum-dot network based on the echo state property
Naoya Tate, Yuki Miyata, Shun-ichi Sakai, Akihiro Nakamura, Suguru Shimomura, Takahiro Nishimura, Jun Kozuka, Yusuke Ogura, Jun Tanida
OPTICS EXPRESS Vol. 30 No. 9 p. 14669-14676 2022/04 Research paper (scientific journal)
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Tunable reservoir computing based on iterative function systems
Naruki Segawa, Suguru Shimomura, Yusuke Ogura, Jun Tanida
Optics Express Vol. 29 No. 26 p. 43164-43164 2021/12/20 Research paper (scientific journal)
Publisher: The Optical Society
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Fluorescence sensing based on dynamic FRET networks
Yusuke Ogura, Keita Hayashi, Suguru Shimomura, Takahiro Nishimura, Jun Tanida
The 11th Japan-Korea Workshop on Digital Holography & Information Photonics (DHIP 2021) 2021/12 Research paper (international conference proceedings)
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Experimental machine learning for XOR problem using spatio-temporal optical output of quantum dot network
Shunichi Sakai, Akihiro Nakamura, Suguru Shimomura, Takahiro Nishimura, Jun Kozuka, Naoya Tate, Yusuke Ogura, Jun Tanida
The 11th Japan-Korea Workshop on Digital Holography & Information Photonics (DHIP 2021) 2021/12 Research paper (international conference proceedings)
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Holographic subdiffraction limit illumination and its application
Yusuke Ogura
Holography, Diffractive Optics, and Applications XI Vol. 11898 2021/10/09 Research paper (international conference proceedings)
Publisher: SPIE
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Verification of spatiotemporal optical property of quantum dot network by regioselective photon-counting experiment
Shunichi Sakai, Akihiro Nakamura, Suguru Shimomura, Takahiro Nishimura, Jun Kozuka, Naoya Tate, Yusuke Ogura, Jun Tanida
Photonics in Switching and Computing 2021/09 Research paper (international conference proceedings)
Publisher: OSA
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Nonlinear-response neurons using a quantum-dot network for neuromorphic computin
Suguru Shimomura, Takahiro Nishimura, Jun Kozuka, Naoya Tate, Shunichi Sakai, Yusuke Ogura, Jun Tanida
Photonics in Switching and Computing 2021/09 Research paper (international conference proceedings)
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Echo state property of a quantum-dot network for nano-photonic reservoir computing
Naoya Tate, Yuki Miyata, Suguru Shimomura, Takahiro Nishimura, Jun Kozuka, Yusuke Ogura, Jun Tanida
The 12th International Conference on Optics-photonics Design & Fabrication (ODF'20) 2021/06 Research paper (international conference proceedings)
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Construction of fluorescence tags using energy transfer networks on self-assembled DNA
Yusuke Ogura, Jinya Inoue, Takahiro Nishimura, Jun Tanida
The 12th International Conference on Optics-photonics Design & Fabrication (ODF'20) 2021/06 Research paper (international conference proceedings)
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Fluorescence tags using FRET networks and DNA structural change
Yusuke Ogura, Keita Hayashi, Suguru Shimomura, Jun Tanida
The 7th Biomedical Imaging and Sensing Conference (BISC2021) 2021/04 Research paper (international conference proceedings)
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Temporal signal generation using FRET-based quantum dot network for optical reservoir computing
Suguru Shimomura, Takahiro Nishimura, Jun Kozuka, Yuki Miyata, Shunichi Sakai, Naoya Tate, Yusuke Ogura, Jun Tanida
Information Photonics 2020 (IP'20) 2020/09 Research paper (international conference proceedings)
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Basic experimental verification of spatially parallel pulsed-I/O optical reservoir computing
Yuki Miyata, Shunichi Sakai, Suguru Shimomura, Takahiro Nishimura, Naoya Tate, Yusuke Ogura, Jun Tanida
Information Photonics 2020 (IP'20) 2020/09 Research paper (international conference proceedings)
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Improvement of signal-to-noise ratio in super resolution imaging using subdiffraction limited spots by additional digital signal processing
Riki Yamada, Yusuke Ogura, Takahiro Nishimura, Yosuke Tamada, Takashi Murata, Jun Tanida
Biomedical Imaging and Sensing Conference 2020 Vol. 11521 2020/06/15 Research paper (international conference proceedings)
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Nanoscale Optical Logic Circuits by Single-Step FRET
Jinya Inoue, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
IEEE Photonics Journal Vol. 12 No. 2 p. 1-12 2020/04 Research paper (scientific journal)
Publisher: Institute of Electrical and Electronics Engineers ({IEEE})
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Spectral and temporal optical signal generation using randomly distributed quantum dots
Suguru Shimomura, Takahiro Nishimura, Yuki Miyata, Naoya Tate, Yusuke Ogura, Jun Tanida
OPTICAL REVIEW Vol. 27 No. 2 p. 264-269 2020/04 Research paper (scientific journal)
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Preface
Ogura, Y., Hagen, N., Hayasaki, Y., Saarinen, J.J., Taue, S., Vartiainen, E., Yokota, M.
Optical Review Vol. 27 No. 2 p. 177-177 2020 Research paper (scientific journal)
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Optical decomposition of DNA gel and modification of object mobility on micrometre scale
Suguru Shimomura, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
SCIENTIFIC REPORTS Vol. 9 2019/12 Research paper (scientific journal)
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Object movement change in optical decomposition of DNA gels
Suguru Shimomura, Takahiro Nishimura Yusuke Ogura, Jun Tanida
2019/12 Research paper (international conference proceedings)
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Superresolution bioimaging by subdiffraction-limit pattern illumination
Yusuke Ogura, Riki Yamada, Takahiro Nishimura, Yosuke Tamada, Takashi Murata, Jun Tanida
2019/12 Research paper (international conference proceedings)
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Spatial phase shaping of ultrashort laser pulses to overcome the diffraction limit
Yusuke Ogura
OSA Continuum Vol. 2 No. 11 p. 3240-3250 2019/11/15 Research paper (scientific journal)
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空間光変調器を用いた生細胞イメージング
玉田洋介, 小倉裕介, 亀井保博, 服部雅之
フォトニクスニュース Vol. 5 No. 4 p. 188-192 2019/11
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Holographic femtosecond laser processing with sub-diffraction-limit focusing
Yoshio Hayasaki, Satoshi Hasegawa, Daisuke Barada, Yusuke Ogura, Jun Tanida
Frontiers in Optics + Laser Science APS/DLS 2019/09 Research paper (international conference proceedings)
Publisher: OSA
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Super-resolution imaging by scanning subdiffraction-limit optical pattern
Yusuke Ogura, Daiki Shinkawa, Takahiro Nishimura, Yosuke Tamada, Jun Tanida
p. 61-62 2019/08 Research paper (international conference proceedings)
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A quantum dot reservoir based on Förster resonance energy transfer for optical reservoir computing
Jun Tanida, Suguru Shimomura, Takahiro Nishimura, Yuki Miyata, Naoya Tate, Yusuke Ogura
2019/08 Research paper (other academic)
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Generation of a subdiffraction-limit light sheet with micrometer-order thickness using a computer-generated hologram
Ogura, Y., Kanai, R., Tanida, J.
Optical Review Vol. 26 No. 5 2019/07 Research paper (scientific journal)
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Integration of DNA and Photonics for Computing, Sensing, and Fabrication
Yusuke Ogura, Jinya Inoue, Suguru Shimomura, Takahiro Nishimura, Jun Tanida
2019/06 Research paper (international conference proceedings)
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Reversible transformation of DNA gels using light signals
Suguru Shimomura, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
Proceedings of SPIE - The International Society for Optical Engineering Vol. 11140 2019/04 Research paper (international conference proceedings)
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Subdiffraction-limit optical-pattern generation and its application to super-resolution imaging
Yusuke Ogura, Daiki Shinkawa, Takahiro Nishimura, Yosuke Tamada, Jun Tanida
2019/04 Research paper (international conference proceedings)
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Proximity-complex amplitude optimization for focused beam shaping
Satoshi Hasegawa, Yusuke Ogura, Jun Tanida, Yoshio Hayasaki
2019/04 Research paper (international conference proceedings)
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Energy transfer in quantum-dot network for optical reservoir computing
Suguru Shimomura, Takahiro Nishimura, Yuki Miyata, Naoya Tate, Yusuke Ogura, Jun Tanida
2019/04 Research paper (international conference proceedings)
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Patterning of DNA hydrogels by photodecomposition with visible light
Suguru Shimomura, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
2019/02 Research paper (international conference proceedings)
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Resolution enhancement in nonlinear interferenceless COACH with point response of subdiffraction limit patterns
Rai, M.R., Vijayakumar, A., Ogura, Y., Rosen, J.
Optics Express Vol. 27 No. 2 p. 391-403 2019/01 Research paper (scientific journal)
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Nanoscale optical logic circuits based on FRET switches
Jinya Inoue, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
2018/12 Research paper (international conference proceedings)
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Laser scanning microscopy with subdiffraction-limit pattern
Yusuke Ogura, Daiki Shinkawa, Takahiro Nishimura, Yosuke Tamada, Jun Tanida
2018/12 Research paper (international conference proceedings)
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Holographic Generation of a Subdiffraction-limit Light Sheet Using an Objective Lens Combined with a Cylindrical Lens
Yusuke Ogura, Ryoko Kanai, Jun Tanida
2018/11 Research paper (international conference proceedings)
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Motion control of micrometer-sized object by photodecompotision of DNA hydrogels
Suguru Shimomura, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
2018/10 Research paper (international conference proceedings)
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Numerical study on trapping and guiding of nanoparticles in a flow using scattering field of laser light Preface
Ishii Katsuhiro, Ogura Yusuke, Nishidate Izumi, Fabritius Tapio, Toivonen Juha, Hayasaki Yoshio
OPTICAL REVIEW Vol. 25 No. 3 p. 422-422 2018/06
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Preface
Katsuhiro Ishii, Yusuke Ogura, Izumi Nishidate, Tapio Fabritius, Juha Toivonen, Yoshio Hayasaki
Optical Review Vol. 25 No. 3 2018/06/01 Research paper (scientific journal)
Publisher: SpringerOpen
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Experimental assessment and analysis of super-resolution in fluorescence microscopy based on multiple-point spread function fitting of spectrally demultiplexed images
Takahiro Nishimura, Hitoshi Kimura, Yusuke Ogura, Jun Tanida
OPTICAL REVIEW Vol. 25 No. 3 p. 384-390 2018/06 Research paper (scientific journal)
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Holographic complex-amplitude modulation for generating sub-diffraction-limit spot applied to laser material processing
Satoshi Hasegawa, Cao Hoai Vu, Yusuke Ogura, Jun Tanida, Yoshio Hayasaki
2018/04 Research paper (international conference proceedings)
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Microscale optical cryptography using a subdiffraction-limit optical key
Yusuke Ogura, Masahiko Aino, Jun Tanida
Japanese Journal of Applied Physics Vol. 57 No. 4 2018/04/01 Research paper (scientific journal)
Publisher: Japan Society of Applied Physics
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Photothermal fabrication of microscale patterned DNA hydrogels
Suguru Shimomura, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
ROYAL SOCIETY OPEN SCIENCE Vol. 5 No. 2 2018/02 Research paper (scientific journal)
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Photonically driven DNA nanomachine with hybrid functions towards cell measurement
Yusuke Ogura, Takahiro Nishimura, Kenji Yamada, Jun Tanida
Progress in Biomedical Optics and Imaging - Proceedings of SPIE Vol. 10510 2018 Research paper (international conference proceedings)
Publisher: SPIE
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Lateral spatial resolution improvement in laser scanning fluorescence microscopy using a subdiffraction limit optical spot
Takahiro Nishimura, Daiki Shinkawa, Yusuke Ogura, Yosuke Tamada, Jun Tanida
BIOMEDICAL IMAGING AND SENSING CONFERENCE Vol. 10711 2018 Research paper (international conference proceedings)
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Photonically driven DNA nanomachine with hybrid functions towards cell measurement
Yusuke Ogura, Takahiro Nishimura, Kenji Yamada, Jun Tanida
FRONTIERS IN BIOLOGICAL DETECTION: FROM NANOSENSORS TO SYSTEMS X Vol. 10510 2018 Research paper (international conference proceedings)
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Three dimensional structure of subdiffraction limit optical patterns
Yusuke Ogura, Jun Tanida
2017/12 Research paper (international conference proceedings)
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A molecular-sized optical logic circuit for digital modulation of a fluorescence signal
Takahiro Nishimura, Karin Tsuchida, Yusuke Ogura, Jun Tanida
2017/11 Research paper (international conference proceedings)
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Proximity amplitude and phase control for beam reduction using computer-generated hologram
Cao Hoai Vu, Satoshi Hasegawa, Yusuke Ogura, Jun Tanida, Yoshio Hayasaki
2017/11 Research paper (international conference proceedings)
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Photo-induced formation of DNA hydrogel using quenchers
Suguru Shimomura, Takahitro Nishimura, Yusuke Ogura, Jun Tanida
2017/09
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A photonic DNA processor using excitation energy transfer-based signaling
Takaniro Nishimura, Yusuke Ogura, Jun Tanida
2017/09
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Quantitative evaluation of DNA hydrogel growth induced by light
Suguru Shimomura, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
2017/09 Research paper (international conference proceedings)
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Performance evaluation of subdiffraction-limit light sheets
Yusuke Ogura, Jun Tanida
2017/09 Research paper (international conference proceedings)
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Holographic Generation of Subdiffraction-Limit Light Sheets
Yusuke Ogura, Kazuyuki Ohno, Jun Tanida
2017/08 Research paper (international conference proceedings)
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Optical fabrication of patterned DNA hydrogel
Takahiro Nishimura, Suguru Shimomura, Yusuke Ogura, Jun Tanida
2017/06 Research paper (international conference proceedings)
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Fluorescence encoded super resolution imaging based on a location estimation algorithm for high-density fluorescence probes
Takahiro Nishimura, Hitoshi Kimura, Yusuke Ogura, Jun Tanida
OPTICAL REVIEW Vol. 24 No. 2 p. 212-218 2017/04 Research paper (scientific journal)
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Optical Fabrication of DNA Hydrogel Using Holographic Pattern
Suguru Shimomura, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
2017/04 Research paper (international conference proceedings)
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光演算のトピックス
小倉裕介
光技術動向調査報告書（2016年度） p. 194-197 2017/03
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Bayesian based fluorescence coded imaging using quantum dots
Takahiro Nishimura, Hitoshi Kimura, Yusuke Ogura, Jun Tanida
BIOMEDICAL IMAGING AND SENSING CONFERENCE Vol. 10251 2017 Research paper (international conference proceedings)
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Computer generated holograms generating subdiffraction limit optical patterns
Yusuke Ogura, Jun Tanida
Optics InfoBase Conference Papers Vol. 2017 2017 Research paper (international conference proceedings)
Publisher: OSA - The Optical Society
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Multiplexed fluorescence readout using time responses of color coded signals for biomolecular detection
Takahiro Nishimura, Yusuke Ogura, Jun Tanida
BIOMEDICAL OPTICS EXPRESS Vol. 7 No. 12 p. 5284-5293 2016/12 Research paper (scientific journal)
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Subdiffraction limit optical pattern generation and its application to security
Yusuke Ogura, Jun Tanida
2016/12 Research paper (international conference proceedings)
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Diffractive fan-out elements for wavelength-multiplexing subdiffraction-limit spot generation in three dimensions
Yusuke Ogura, Masahiko Aino, Jun Tanida
APPLIED OPTICS Vol. 55 No. 23 p. 6371-6380 2016/08 Research paper (scientific journal)
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Optically controlled release of DNA based on nonradiative relaxation process of quenchers
Yusuke Ogura, Atsushi Onishi, Takahiro Nishimura, Jun Tanida
BIOMEDICAL OPTICS EXPRESS Vol. 7 No. 6 p. 2142-2153 2016/06 Research paper (scientific journal)
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Bayesian-based Localization of Fluorescence-encoded Images for Single Shot Superresolution Fluorescence Imaging
Hitoshi Kimura, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
2016/05 Research paper (international conference proceedings)
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Nanoscale information technology based on photonic DNA computing
Yusuke Ogura, Jun Tanida
VLSI Micro-and Nanophotonics: Science, Technology, and Applications 2016/04/19 Part of collection (book)
Publisher: CRC Press
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Diffractive optical elements for multi-dimensional subdiffraction-limit spot generation: design, demonstration, and characterization
Yusuke Ogura, Jun Tanida
OPTICAL DESIGN AND TESTING VII Vol. 10021 2016 Research paper (international conference proceedings)
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Photonic DNA computing towards functional biomolecular sensing
Yusuke Ogura, Jun Tanida
2015/11 Research paper (international conference proceedings)
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Bayesian-based PSF decomposition of fluorescence coded images for super-resolution fluorescence imaging
Hitoshi Kimura, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
2015/09 Research paper (international conference proceedings)
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Multi-dimensional generation of sub-diffraction-limited optical patterns using propagating light
Yusuke Ogura, Masahiko Aino, Jun Tanida
2015/09 Research paper (international conference proceedings)
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Reconstruction of complex-amplitude from quantized diffraction patterns by one-shot ptychography
Mio Fukui, Yusuke Ogura, Jun Tanida
2015/09 Research paper (international conference proceedings)
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Biomolecular sensing with in-situ computation by photonic DNA computing
Yusuke Ogura, Takahiro Nishimura, Jun Tanida
2015/09 Research paper (international conference proceedings)
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Optically controllable molecular logic circuits
Takahiro Nishimura, Ryo Fujii, Yusuke Ogura, Jun Tanida
APPLIED PHYSICS LETTERS Vol. 107 No. 1 2015/07 Research paper (scientific journal)
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Nanoscale energy-route selector consisting of multiple photo-switchable fluorescence-resonance-energy-transfer structures on DNA
Ryo Fujii, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
OPTICAL REVIEW Vol. 22 No. 2 p. 316-321 2015/04 Research paper (scientific journal)
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Generation of Multiple Sub-diffraction-limit Spots in 3D Space with Propagating Light
Masahiko Aino, Yusuke Ogura, Jun Tanida
2015 14TH WORKSHOP ON INFORMATION OPTICS (WIO) 2015 Research paper (international conference proceedings)
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Single-shot measurement of a complex-amplitude distribution by iterative reconstruction using diffraction images
Yusuke Ogura, Jun Tanida
2014/12 Research paper (international conference proceedings)
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Optical switch of FRET-based molecular logic processes with a nanoscale energy-route selector
Ryo Fujii, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
2014/12 Research paper (international conference proceedings)
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Single-shot phase imaging with a coded aperture
Ryoichi Horisaki, Yusuke Ogura, Masahiko Aino, Jun Tanida
OPTICS LETTERS Vol. 39 No. 22 p. 6466-6469 2014/11 Research paper (scientific journal)
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Design and demonstration of fan-out elements generating an array of subdiffraction spots
Yusuke Ogura, Masahiko Aino, Jun Tanida
OPTICS EXPRESS Vol. 22 No. 21 p. 25196-25207 2014/10 Research paper (scientific journal)
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Controlled-release of single-stranded DNA based on photothermal effect using BHQ
Atsushi Onishi, Yusuke Ogura, Jun Tanida
JSAP-OSA Joint Symposia, JSAP 2014 2014/09/01 Research paper (international conference proceedings)
Publisher: Optical Society of America (OSA)
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Photonic DNA Processors for Optical Communication between Nano and MacroWorld
Takahiro Nishimura, Yusuke Ogura, Kenji Yamada, Yuko Ohno, Jun Tanida
IEICE Proceeding Series No. 46 p. 582-585 2014/09 Research paper (international conference proceedings)
Publisher: The Institute of Electronics, Information and Communication Engineers
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An implementation of stochastic computing using DNA hybridization and fluorescence resonance energy transfer
Takahiro Nishimura, Yusuke Ogura, Jun Tanida
2014/09 Research paper (international conference proceedings)
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Biomolecule-to-fluorescent-color encoder: modulation of fluorescence emission via DNA structural changes
Takahiro Nishimura, Yusuke Ogura, Kenji Yamada, Yuko Ohno, Jun Tanida
BIOMEDICAL OPTICS EXPRESS Vol. 5 No. 7 p. 2082-2090 2014/07 Research paper (scientific journal)
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Design and demonstration of diffractive fan-out elements generating an array of sub-diffraction-limit spots
Yusuke Ogura, Masahiko Aino, Jun Tanida
Digital Holography & 3-D Imaging (DH) 2014/07 Research paper (international conference proceedings)
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Feasibility Study of Multiplex Biomolecular Detection based on Biomolecule-to-fluorescence-color Encode
Takahiro Nishimura, Yusuke Ogura, Kenji Yamada, Yuko Ohno, Jun Tanida
2014/04 Research paper (international conference proceedings)
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Amplification and modulation of fluorescent signals by using hybridization chain reactions for multiplexed sensing of biomolecules in a one-pot
Takahiro Nishimura, Yusuke Ogura, Kenji Yamada, Yuko Ohno, Jun Tanida
Progress in Biomedical Optics and Imaging - Proceedings of SPIE Vol. 8954 2014 Research paper (international conference proceedings)
Publisher: SPIE
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Fluorescence amplification based on DNA structural changes for enzyme-free detection of microRNA
Takahiro Nishimura, Kenji Yamada, Yuko Ohno, Yusuke Ogura, Lun Tanida
2014 WORLD AUTOMATION CONGRESS (WAC): EMERGING TECHNOLOGIES FOR A NEW PARADIGM IN SYSTEM OF SYSTEMS ENGINEERING 2014 Research paper (international conference proceedings)
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Amplification and modulation of fluorescent signals by using hybridization chain reactions for multiplexed sensing of biomolecules in a one-pot
Takahiro Nishimura, Yusuke Ogura, Kenji Ymada, Yuko Ohno, Jun Tanida
NANOSCALE IMAGING, SENSING, AND ACTUATION FOR BIOMEDICAL APPLICATIONS XI Vol. 8954 2014 Research paper (international conference proceedings)
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Photonic DNA nano-processor: a photonics-based approach to molecular processing mediated by DNA
Yusuke Ogura, Takahiro Nishimura, Hirotsugu Yamamoto, Kenji Yamada, Jun Tanida
Nanophotonic Information Physics (Springer) p. 91-113 2013/12 Research paper (scientific journal)
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Optically programmable molecular information processing
Yusuke Ogura, Ryo Fujii, Takahiro Nishimura, Yuki Kazayama, Jun Tanida
The 3rd Japan-Korea Workshop on Digital Holography and Information Photonics (DHIP2013) 2013/11 Research paper (international conference proceedings)
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How to use oligomer DNA
Yusuke Ogura
KOGAKU Vol. 42 No. 10 p. 519-520 2013/10
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Optofluidic DNA computation using holographic optical tweezers
Yusuke Ogura, Yuki Kazayama, Jun Tanida
2013/10 Research paper (international conference proceedings)
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Optical Control of Fluorescence Resonance Energy Transfer Paths in Photonic DNA Nano-processor
Yusuke Ogura, Ryo Fujii, Takahiro Nishimura, Jun Tanida
2013/10 Research paper (international conference proceedings)
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Optical manipulation of liquid-based microreactors in optofluidic dna computation
Takahiro Nishimura, Yuki Kazayama, Yusuke Ogura, Jun Tanida
Optical Trapping Applications, OTA 2013 2013 Research paper (international conference proceedings)
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Photonic DNA processors with fluorescence resonance energy transfer-based signaling
T. Nishimura, Y. Ogura, H. Yamamoto, K. Yamada, J. Tanida
Pacific Rim Conference on Lasers and Electro-Optics, CLEO - Technical Digest 2013 Research paper (international conference proceedings)
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Amplification and encoding of biomolecular signals with designed reactions of DNA
Takahiro Nishimura, Kenji Yamada, Yuko Ohno, Yusuke Ogura, Jun Tanida
6TH BIOMEDICAL ENGINEERING INTERNATIONAL CONFERENCE (BMEICON 2013) 2013 Research paper (international conference proceedings)
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A Nanoscale Set-Reset Flip-Flop in Fluorescence Resonance Energy Transfer-Based Circuits
Takahiro Nishimura, Yusuke Ogura, Jun Tanida
APPLIED PHYSICS EXPRESS Vol. 6 No. 1 2013/01 Research paper (scientific journal)
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Fluorescence resonance energy transfer-based molecular logic circuit using a DNA scaffold
Takahiro Nishimura, Yusuke Ogura, Jun Tanida
APPLIED PHYSICS LETTERS Vol. 101 No. 23 2012/12 Research paper (scientific journal)
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Functional molecular sensing using photonic DNA nano-processor（共著）
Yusuke Ogura, Takahiro Nishimura, Hirotsugu Yamamoto, Kenji Yamada, Jun Tanida
Technical digest of the 1st International Workshop on Information Physics and Computing in Nano-scale Photonics and Materials (IPCN) 2012/09 Research paper (international conference proceedings)
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Optofluidic DNA computation based on optically manipulated microdroplets
Takahiro Nishimura, Yusuke Ogura, Jun Tanida
MICROFLUIDICS AND NANOFLUIDICS Vol. 13 No. 1 p. 1-7 2012/07 Research paper (scientific journal)
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Reusable molecular sensor based on photonic activation control of DNA probes
Takahiro Nishimura, Yusuke Ogura, Jun Tanida
BIOMEDICAL OPTICS EXPRESS Vol. 3 No. 5 p. 920-926 2012/05 Research paper (scientific journal)
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Photonic DNA Nanomachine
OGURA Yusuke, NISHIMURA Takahiro, TANIDA Jun
Vol. 41 No. 2 p. 90-92 2012/02/10
Publisher:
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1I1534 DNA scaffold logic : logic operation on molecular inputs using FRET cascades(Bioinformatics & Bioengineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)
Nishimura Takahiro, Ogura Yusuke, Yamamoto Hirotsugu, Yamada Kenji, Tanida Jun
Seibutsu Butsuri Vol. 52 2012
Publisher: The Biophysical Society of Japan General Incorporated Association
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Photonic Nanoscale Automaton Based on Photo-/Heat-Regulated DNA Strand Displacement Reactions
Hiroto Sakai, Yusuke Ogura, Jun Tanida
INTERNATIONAL JOURNAL OF UNCONVENTIONAL COMPUTING Vol. 8 No. 3 p. 207-220 2012 Research paper (scientific journal)
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Large-area manipulation of microdroplets by holographic optical tweezers based on a hybrid diffractive system
Yusuke Ogura, Yuki Kazayama, Takahiro Nishimura, Jun Tanida
APPLIED OPTICS Vol. 50 No. 34 p. H36-H41 2011/12 Research paper (scientific journal)
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DNAコンピューティングの原理と展開
小倉裕介
生産と技術 Vol. 63 No. 3 p. 28-33 2011/07
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Evaluation of holographic optical tweezers based on a hybrid diffractive system for manipulating microdroplets
Yuki Kazayama, Takahiro Nishimura, Yusuke Ogura, Jun Tanida
2011/05 Research paper (international conference proceedings)
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Spatially parallel control of DNA reactions in optically manipulated microdroplets
Yusuke Ogura, Takahiro Nishimura, Jun Tanida
JOURNAL OF NANOPHOTONICS Vol. 5 2011/05 Research paper (scientific journal)
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Prototype demonstration of a photonic DNA processor: a photonically-controlled DNA nanomachine of sensing, computing, and actuating
Takahiro Nishimura, Yusuke Ogura, Kenji Yamda, Hirotsugu Yamamoto, Jun Tanida
2011/04 Research paper (international conference proceedings)
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光情報処理研究のトピックス
小倉裕介
光技術動向調査報告書 2011/03
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3J1346 Bio-molecular sensing by use of DNA that can be activated and reset via photonic signals(Bioengineering2,The 49th Annual Meeting of the Biophysical Society of Japan)
Nishimura Takahiro, Ogura Yusuke, Yamamoto Hirotsugu, Yamada Kenji, Tanida Jun
Seibutsu Butsuri Vol. 51 2011
Publisher: The Biophysical Society of Japan General Incorporated Association
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Reversible Regulation of Position of DNA Inside a Nano-Structure via Photonic Signaling to Implement State-Transitions
Hiroto Sakai, Yusuke Ogura, Jun Tanida
INTERNATIONAL JOURNAL OF UNCONVENTIONAL COMPUTING Vol. 7 No. 1-2 p. 39-52 2011 Research paper (scientific journal)
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A photonic DNA processor: concept and implementation
Takahiro Nishimura, Yusuke Ogura, Kenji Yamada, Hirotsugu Yamamoto, Jun Tanida
NANOENGINEERING: FABRICATION, PROPERTIES, OPTICS, AND DEVICES VIII Vol. 8102 2011 Research paper (international conference proceedings)
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Optical manipulation of microdroplets by use of a spatial light modulator and a static computer generated hologram
Y. Ogura, Y. Kazayama, T. Nishimura, J. Tanida
2011 ICO International Conference on Information Photonics, IP 2011 2011 Research paper (international conference proceedings)
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Implementation of a nanoscale automaton using DNA conformation controlled by optical signals
Sakai, H., Ogura, Y., Tanida, J.
Japanese Journal of Applied Physics Vol. 48 No. 9 Part 3 p. 09LA01-09LA01 2009/09/24 Research paper (scientific journal)
Publisher: IOP Publishing
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An Active Intraoral Shape Measurement Scheme Using a Compact Compound-Eye Camera with Integrated Pattern Projectors
Keiichiro Kagawa, Hiroyuki Tanabe, Chizuko Ogata, Yusuke Ogura, Yoshizumi Nakao, Takashi Toyoda, Yasuo Masaki, Masatoshi Ueda, Jun Tanida
JAPANESE JOURNAL OF APPLIED PHYSICS Vol. 48 No. 9 2009/09 Research paper (scientific journal)
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Self-Contained Photonically-Controlled DNA Tweezers
Yusuke Ogura, Takahiro Nishimura, Jun Tanida
APPLIED PHYSICS EXPRESS Vol. 2 No. 2 2009/02 Research paper (scientific journal)
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A compact shape-measurement module based on a thin compound-eye camera with multiwavelength diffractive pattern projection for intraoral diagnosis
K. Kagawa, H. Tanabe, C. Ogata, R. Horisaki, Y. Ogura, Y. Nakao, T. Toyoda, Y. Masaki, M. Ueda, J. Tanida
Proceedings of SPIE - The International Society for Optical Engineering Vol. 7442 2009 Research paper (international conference proceedings)
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Three-dimensional dynamic optical manipulation by combining a diffractive optical element and a spatial light modulator
Zheng, M., Ogura, Y., Tanida, J.
Optical Review Vol. 15 No. 2 p. 105-109 2008/03 Research paper (scientific journal)
Publisher: Springer Science and Business Media LLC
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Photonic implementation of quantum computation algorithm based on spatial coding
Tate, N., Ogura, Y., Tanida, J.
Optical Review Vol. 14 No. 5 p. 260-265 2007/09 Research paper (scientific journal)
Publisher: Springer Science and Business Media LLC
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Three-dimensional information acquisition using a compound imaging system
Ryoichi Horisaki, Satoru Irie, Yusuke Ogura, Jun Tanida
OPTICAL REVIEW Vol. 14 No. 5 p. 347-350 2007/09 Research paper (scientific journal)
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光情報処理
小倉裕介
光学 Vol. 48 No. 4 p. 31-35 2007/04
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Non-quantum implementation of quantum computation algorithm using a spatial coding technique
N Tate, Y Ogura, J Tanida
OPTICS COMMUNICATIONS Vol. 251 No. 1-3 p. 124-131 2005/07 Research paper (scientific journal)
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Observation of a stacking process of microparticles with multiple beams
F Sumiyama, Y Ogura, J Tanida
APPLIED OPTICS Vol. 44 No. 16 p. 3271-3275 2005/06 Research paper (scientific journal)
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Parallel translation of DNA clusters by vertical cavity surface emitting laser (VCSEL) array trapping
F Sumiyama, T Kawakami, Y Ogura, J Tanida
NANOPHOTONICS: INTEGRATING PHOTOCHEMISTRY, OPTICS AND NANO/BIO MATERIALS STUDIES Vol. 1 p. 411-420 2004 Research paper (international conference proceedings)
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Stacking and translation of microscopic particles by means of 2x2 beams emitted from a vertical-cavity surface-emitting laser array
F Sumiyama, Y Ogura, J Tanida
APPLIED PHYSICS LETTERS Vol. 82 No. 18 p. 2969-2971 2003/05 Research paper (scientific journal)
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Optoelectronic Parallel-Matching Architecture: Architecure Description, Performance Estimation, and Prototype Demonstration
Keiichiro Kagawa, Kouich Nitta, Yusuke Ogura, Jun Tanida, Yoshiki Ichioka, Nara National College of Technology
Applied Optics Vol. 40 No. 2 p. 283-298 2001/01 Research paper (scientific journal)
Publisher: Optical Society of America
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Wavelength-multiplexing diffractive phase elements: Design, fabrication, and performance evaluation
Yusuke Ogura, Nobuhiro Shirai, Jun Tanida, Yoshiki Ichioka
Journal of the Optical Society of America A: Optics and Image Science, and Vision Vol. 18 No. 5 p. 1082-1092 2001 Research paper (scientific journal)
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Optoelectronic parallel-matching architecture: architecture description, performance estimation, and prototype demonstration
K Kagawa, K Nitta, Y Ogura, J Tanida, Y Ichioka
APPLIED OPTICS Vol. 40 No. 2 p. 283-298 2001/01 Research paper (scientific journal)
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Board-to-board optical interconnects by means of wavelength multiplexing diffractive phase element
Y Ogura, N Shirai, J Tanida
CLEO(R)/PACIFIC RIM 2001, VOL II, TECHNICAL DIGEST p. 696-697 2001 Research paper (international conference proceedings)
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A computing-oriented optoelectronic networking architecture (CONA) with a large-fan-out high-speed reconfigurable optical processor
K Kagawa, Y Ogura, J Tanida
CLEO(R)/PACIFIC RIM 2001, VOL II, TECHNICAL DIGEST p. 682-683 2001 Research paper (international conference proceedings)
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Prototype demonstration of discrete correlation processor-2 based on high-speed optical image steering for large-fan-out reconfigurable optical interconnections
K Kagawa, Y Ogura, J Tanida, Y Ichioka
OPTICAL REVIEW Vol. 8 No. 1 p. 18-25 2001/01 Research paper (scientific journal)
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波長多重位相型計算機ホログラムの設計と特性評価
光学 Vol. Vol. 30, 183-184/, 2001
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Diffractive Phase Element for Reducing a Diameter of Main-Lobe of a Focal Spot
Yusuke Ogura, Jun Tanida, Yoshiki Ichioka, Nara National, College of Technology, Yoshiaki Mokuno, Osaka National, Research Institute, Katsunori Matsuoka, Osaka National, Research Institute
OPTICAL STORAGE AND OPTICAL INFORMATION PROCESSING Vol. 4081 p. 226-235 2000/07 Research paper (international conference proceedings)
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Architecture description and prototype demonstration of optoelectronic parallel-matching architecture
K Kagawa, K Nitta, Y Ogura, J Tanida, Y Ichioka
PARALLEL AND DISTRIBUTED PROCESSING, PROCEEDINGS Vol. 1800 p. 1118-1125 2000 Research paper (scientific journal)
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Discrete correlation processor as a building core of a digital optical computing system: architecture and optoelectronic embodiment
K Kagawa, Y Ogura, J Tanida, Y Ichioka
APPLIED OPTICS Vol. 38 No. 35 p. 7276-7281 1999/12 Research paper (scientific journal)
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Discrete correlation processor (DCP) as a building core of a digital optical computing system: architecture and optoelectronic embodiment
K Kagawa, J Tanida, Y Ogura, Y Ichioka
OPTICS IN COMPUTING, TECHNICAL DIGEST p. 75-77 1999 Research paper (international conference proceedings)
